RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 FAM149AA5PLN7 773 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 METTL21EPA6NDL7 271 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 ODC1P11926 461 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 PRG2P13727 222 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 STYK1Q6J9G0 422 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 FAM122CQ6P4D5 195 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 ZNF613Q6PF04 617 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 AFTPHQ6ULP2 937 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 FAM220AQ7Z4H9 259 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 ADGRF2Q8IZF7 708 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 SRFBP1Q8NEF9 429 aaKnown RBP7.01□□□□□ -1.29
SMC1A-201ENST00000322213 MFSD14AQ96MC6 490 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 AGAP2Q99490 1192 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 TXLNGYQ9BZA5 131 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 XKR8Q9H6D3 395 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 LIN28AQ9H9Z2 209 aaKnown RBP7.01□□□□□ -1.29
SMC1A-201ENST00000322213 PAK1IP1Q9NWT1 392 aaPredicted RBP7.01□□□□□ -1.29
SMC1A-201ENST00000322213 PAQR5Q9NXK6 330 aaPredicted RBP7.01□□□□□ -1.29
SMC1A-201ENST00000322213 SIRPGQ9P1W8 387 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 SNCAIPQ9Y6H5 919 aa7.01□□□□□ -1.29
SMC1A-201ENST00000322213 SYNDIG1LA6NDD5 238 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 STMND1H3BQB6 276 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 JCHAINP01591 159 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 MYL3P08590 195 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 FGFR2P21802 821 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 CD40LGP29965 261 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 CACNB3P54284 484 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 PTPN5P54829 565 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 POU5F1Q01860 360 aaKnown RBP7□□□□□ -1.29
SMC1A-201ENST00000322213 CSTF1Q05048 431 aaKnown RBP7□□□□□ -1.29
SMC1A-201ENST00000322213 CLEC10AQ8IUN9 316 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 KCNQ5Q9NR82 932 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 TEX264Q9Y6I9 313 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 ATRNL1Q5VV63 1379 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 H3BMQ9 156 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 ARPC2O15144 300 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 CAPN15O75808 1086 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 CYP7B1O75881 506 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 RHDQ02161 417 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 NFATC3Q12968 1075 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 HNRNPDQ14103 355 aaKnown RBP7□□□□□ -1.29
SMC1A-201ENST00000322213 PTGES3Q15185 160 aaKnown RBP7□□□□□ -1.29
SMC1A-201ENST00000322213 SMUG1Q53HV7 270 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 ALFQ53S48 1182 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 FAM131BQ86XD5 332 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 MAP4K3Q8IVH8 894 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 EEF1AKMT1Q8WVE0 214 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 TWIST2Q8WVJ9 160 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 COG8Q96MW5 612 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 CCDC32Q9BV29 185 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 OXSMQ9NWU1 459 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 EDARQ9UNE0 448 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 CLCA2Q9UQC9 943 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 NR2E1Q9Y466 385 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 DFNA5O60443 496 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 UROSP10746 265 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 ZNF182P17025 639 aaPredicted RBP7□□□□□ -1.29
SMC1A-201ENST00000322213 DSG3P32926 999 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 ARHGEF7Q14155 803 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 SWI5Q1ZZU3 235 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 HAGHLQ6PII5 290 aaPredicted RBP7□□□□□ -1.29
SMC1A-201ENST00000322213 FAM156AQ8NDB6 213 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 PHOX2BQ99453 314 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 USP29Q9HBJ7 922 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 COX7A2P14406 83 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 FBXW4P57775 412 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 YWHAZP63104 245 aaKnown RBP7□□□□□ -1.29
SMC1A-201ENST00000322213 S100A12P80511 92 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 CDKL4Q5MAI5 379 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 NKAPQ8N5F7 415 aaKnown RBP7□□□□□ -1.29
SMC1A-201ENST00000322213 SLC35C2Q9NQQ7 365 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 RASSF1Q9NS23 344 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 MFHAS1Q9Y4C4 1052 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 CRATP43155 626 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 CDH13P55290 713 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 FUT2Q10981 343 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 SLC9B1Q4ZJI4 515 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 OLFML2AQ68BL7 652 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 GLYATQ6IB77 296 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 GLT6D1Q7Z4J2 308 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 KRT78Q8N1N4 520 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 LRRC58Q96CX6 371 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 TMEM246Q9BRR3 403 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 SPON2Q9BUD6 331 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 WDR55Q9H6Y2 383 aaPredicted RBP7□□□□□ -1.29
SMC1A-201ENST00000322213 CUEDC1Q9NWM3 386 aaPredicted RBP7□□□□□ -1.29
SMC1A-201ENST00000322213 ST14Q9Y5Y6 855 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 ATP6AP2A0A1C7CYW4 349 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 DYRK3O43781 588 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 UPK1BO75841 260 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 ERBB2P04626 1255 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 RLN1P04808 185 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 OGNP20774 298 aaKnown RBP7□□□□□ -1.29
SMC1A-201ENST00000322213 LIMK2P53671 638 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 TRIM40Q6P9F5 258 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 CMC1Q7Z7K0 106 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 KBTBD6Q86V97 674 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 ELMOD1Q8N336 334 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 CPXM1Q96SM3 734 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 GBA3Q9H227 469 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms