RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 TFAP2CQ92754 450 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 RANBP9Q96S59 729 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 ZNHIT2Q9UHR6 403 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 PTGDR2Q9Y5Y4 395 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 ARL5AQ9Y689 179 aa12.64□□□□□ -0.39
DNMT3A-202ENST00000321117 TCRBV3S1A0A5B6 114 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 TTC24A2A3L6 582 aaPredicted RBP12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 ACOT8O14734 319 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 EPB42P16452 691 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 IGFBP5P24593 272 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 LEPRP48357 1165 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 PRIM2P49643 509 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 UNC50Q53HI1 259 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 SZRD1Q7Z422 152 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 P2RY8Q86VZ1 359 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 MCOLN3Q8TDD5 553 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 PDGFDQ9GZP0 370 aaPredicted RBP12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 GMIPQ9P107 970 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 SAMHD1Q9Y3Z3 626 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 KCTD3Q9Y597 815 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 AURKAO14965 403 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 ABCB7O75027 752 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 FADS2O95864 444 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 IL7RP16871 459 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 RFC2P35250 354 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 PBX3P40426 434 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 RECQLP46063 649 aaPredicted RBP12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 BCAP31P51572 246 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 ALDH3A2P51648 485 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 ARSFP54793 590 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 SOX4Q06945 474 aaPredicted RBP12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 PMS2P3Q13401 168 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 INO80DQ53TQ3 878 aaPredicted RBP12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 GPR142Q7Z601 462 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 TRIM69Q86WT6 500 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 COLGALT2Q8IYK4 626 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 SVOPLQ8N434 492 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 CLHC1Q8NHS4 586 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 ADAM2Q99965 735 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 NDEL1Q9GZM8 345 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 ARMC7Q9H6L4 198 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 TMEM181Q9P2C4 612 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 PNMA8BQ9ULN7 279 aaPredicted RBP12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 SLC28A1O00337 649 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 TRIM24O15164 1050 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 KERAO60938 352 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 GNAO1P09471 354 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 CNPP09543 421 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 OR4Q2P0C623 313 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 HSD17B1P14061 328 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 ZNF37AP17032 561 aaPredicted RBP12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 ELK4P28324 431 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 IDH2P48735 452 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 PPP1R8Q12972 351 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 SKIV2LQ15477 1246 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 TRIP4Q15650 581 aaPredicted RBP12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 FGD3Q5JSP0 725 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 SIRPB2Q5JXA9 342 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 SLC2A7Q6PXP3 512 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 LSMEM2Q8N112 164 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 HTRA1Q92743 480 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 BTN2A3PQ96KV6 586 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 CGREF1Q99674 301 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 TMEM161AQ9NX61 479 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 GALPQ9UBC7 116 aa12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 RBMX2Q9Y388 322 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-202ENST00000321117 IFRD1O00458 451 aaPredicted RBP12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 ECI2O75521 394 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 SCELO95171 688 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 DGKAP23743 735 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 POU1F1P28069 291 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 TUBA3CQ13748 450 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 TGFBIQ15582 683 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 TIGD5Q53EQ6 642 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 MFSD14CQ5VZR4 134 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 LCN8Q6JVE9 175 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 TMC5Q6UXY8 1006 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 CARM1Q86X55 608 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 NAT16Q8N8M0 369 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 GOLM1Q8NBJ4 401 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 MRGPRX2Q96LB1 330 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 CPA4Q9UI42 421 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 WDR37Q9Y2I8 494 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 RNF11Q9Y3C5 154 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 HEMK1Q9Y5R4 338 aaPredicted RBP12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 DNAJC15Q9Y5T4 150 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 J3KR12 359 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 K7EPI3 171 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 FAM163BP0C2L3 166 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 RPL10P27635 214 aaKnown RBP12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 GNPDA1P46926 289 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 HLCSP50747 726 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 TMBIM6P55061 237 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 YBEYP58557 167 aaPredicted RBP12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 CDH18Q13634 790 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 VEPH1Q14D04 833 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 ATP6AP1Q15904 470 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 CPSF6Q16630 551 aaKnown RBP eCLIP12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 PARP15Q460N3 678 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 SPATS1Q496A3 300 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms