RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 SUN2Q9UH99 717 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 PSME4Q14997 1843 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 SLC1A7O00341 560 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 SNPHO15079 494 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 ANXA9O76027 345 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 FADS2O95864 444 aaKnown RBP9.58□□□□□ -0.88
PTPRA-202ENST00000318266 FTH1P02794 183 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 RPS12P25398 132 aaKnown RBP9.58□□□□□ -0.88
PTPRA-202ENST00000318266 DGKQP52824 942 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 COPZ1P61923 177 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 SEMA3BQ13214 749 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 SNX17Q15036 470 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 OR4D1Q15615 310 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 FSCN1Q16658 493 aaKnown RBP9.58□□□□□ -0.88
PTPRA-202ENST00000318266 CRYBG2Q8N1P7 616 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 VAT1Q99536 393 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 TREX1Q9NSU2 369 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 ERVK-18Q9QC07 812 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 LIMD1Q9UGP4 676 aa9.58□□□□□ -0.88
PTPRA-202ENST00000318266 NRCAMQ92823 1304 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 ZNF99A8MXY4 864 aaPredicted RBP9.57□□□□□ -0.88
PTPRA-202ENST00000318266 STAU1O95793 577 aaKnown RBP9.57□□□□□ -0.88
PTPRA-202ENST00000318266 MOCS2O96007 188 aaPredicted RBP9.57□□□□□ -0.88
PTPRA-202ENST00000318266 PIRTP0C851 137 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 IFITM2Q01629 132 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 COLEC12Q5KU26 742 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 RBM48Q5RL73 367 aaKnown RBP9.57□□□□□ -0.88
PTPRA-202ENST00000318266 LAIR2Q6ISS4 152 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 TFAP2DQ7Z6R9 452 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 TTC30BQ8N4P2 665 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 MCOLN3Q8TDD5 553 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 BPIFB1Q8TDL5 484 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 RORBQ92753 470 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 HDAC2Q92769 488 aaKnown RBP9.57□□□□□ -0.88
PTPRA-202ENST00000318266 ZBED3Q96IU2 234 aaPredicted RBP9.57□□□□□ -0.88
PTPRA-202ENST00000318266 MBOAT4Q96T53 435 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 TRMOQ9BU70 441 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 TMEM30AQ9NV96 361 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 ERAP1Q9NZ08 941 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 KLHL3Q9UH77 587 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 PCDHGA3Q9Y5H0 932 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 GPR45Q9Y5Y3 372 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 ENPP3O14638 875 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 MITFO75030 526 aaPredicted RBP9.57□□□□□ -0.88
PTPRA-202ENST00000318266 SLC22A3O75751 556 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 KRT75O95678 551 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 IL12AP29459 219 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 GGT5P36269 586 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 SCNN1AP37088 669 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 POLR2JP52435 117 aaKnown RBP9.57□□□□□ -0.88
PTPRA-202ENST00000318266 WNT3AP56704 352 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 NRG1Q02297 640 aaPredicted RBP9.57□□□□□ -0.88
PTPRA-202ENST00000318266 SOX4Q06945 474 aaPredicted RBP9.57□□□□□ -0.88
PTPRA-202ENST00000318266 SIM2Q14190 667 aaPredicted RBP9.57□□□□□ -0.88
PTPRA-202ENST00000318266 DGUOKQ16854 277 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 FAM98BQ52LJ0 330 aaKnown RBP9.57□□□□□ -0.88
PTPRA-202ENST00000318266 UBE2UQ5VVX9 321 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 TTC23Q5W5X9 447 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 WSCD1Q658N2 575 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 KIAA0930Q6ICG6 404 aaPredicted RBP9.57□□□□□ -0.88
PTPRA-202ENST00000318266 SULT1C3Q6IMI6 304 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 PAQR9Q6ZVX9 377 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 RAB44Q7Z6P3 723 aaPredicted RBP9.57□□□□□ -0.88
PTPRA-202ENST00000318266 SLC22A15Q8IZD6 547 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 FNDC5Q8NAU1 212 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 PTCD2Q8WV60 388 aaKnown RBP9.57□□□□□ -0.88
PTPRA-202ENST00000318266 S100ZQ8WXG8 99 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 TSPAN17Q96FV3 270 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 MRGPRX2Q96LB1 330 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 CDK15Q96Q40 435 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 CEP44Q9C0F1 390 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 ZNF639Q9UID6 485 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 FAM50BQ9Y247 325 aa9.57□□□□□ -0.88
PTPRA-202ENST00000318266 UNCXA6NJT0 531 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 CHEK2O96017 543 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 GOT2P00505 430 aaKnown RBP9.56□□□□□ -0.88
PTPRA-202ENST00000318266 PRSS56P0CW18 603 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 CDH1P12830 882 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 PAX3P23760 479 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 EDNRBP24530 442 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 GTF2E2P29084 291 aaKnown RBP9.56□□□□□ -0.88
PTPRA-202ENST00000318266 CD40LGP29965 261 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 AGTR2P50052 363 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 CLCN5P51795 746 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 RCAN2Q14206 197 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 TRIP4Q15650 581 aaPredicted RBP9.56□□□□□ -0.88
PTPRA-202ENST00000318266 NKG7Q16617 165 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 TAS2R42Q7RTR8 314 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 PTRH1Q86Y79 214 aaKnown RBP9.56□□□□□ -0.88
PTPRA-202ENST00000318266 ARMC8Q8IUR7 673 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 MTMR14Q8NCE2 650 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 OR13J1Q8NGT2 312 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 TNIP3Q96KP6 325 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 C17orf80Q9BSJ5 609 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 C6orf62Q9GZU0 229 aaPredicted RBP9.56□□□□□ -0.88
PTPRA-202ENST00000318266 RNF39Q9H2S5 420 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 SLC52A3Q9NQ40 469 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 C8orf4Q9NR00 106 aa9.56□□□□□ -0.88
PTPRA-202ENST00000318266 POLR3BQ9NW08 1133 aaPredicted RBP9.56□□□□□ -0.88
PTPRA-202ENST00000318266 MPP6Q9NZW5 540 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms