RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 STN1Q9H668 368 aaKnown RBP12.96□□□□□ -0.33
CPNE1-201ENST00000317677 CLK4Q9HAZ1 481 aaKnown RBP12.96□□□□□ -0.33
CPNE1-201ENST00000317677 APPL1Q9UKG1 709 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 PCDHGB4Q9UN71 923 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 CARD8Q9Y2G2 431 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 PCDHGB5Q9Y5G0 923 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 NOX1Q9Y5S8 564 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 COL6A3P12111 3177 aa12.96□□□□□ -0.33
CPNE1-201ENST00000317677 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.96□□□□□ -0.34
CPNE1-201ENST00000317677 PER2O15055 1255 aa12.96□□□□□ -0.34
CPNE1-201ENST00000317677 LYPLA1O75608 230 aaPredicted RBP12.96□□□□□ -0.34
CPNE1-201ENST00000317677 ZBTB11O95625 1053 aaPredicted RBP12.96□□□□□ -0.34
CPNE1-201ENST00000317677 S1PR4O95977 384 aa12.96□□□□□ -0.34
CPNE1-201ENST00000317677 GSSP48637 474 aa12.96□□□□□ -0.34
CPNE1-201ENST00000317677 ERFP50548 548 aa12.96□□□□□ -0.34
CPNE1-201ENST00000317677 TXNL4AP83876 142 aaKnown RBP12.96□□□□□ -0.34
CPNE1-201ENST00000317677 UBE3AQ05086 875 aa12.96□□□□□ -0.34
CPNE1-201ENST00000317677 NSUN2Q08J23 767 aaKnown RBP eCLIP12.96□□□□□ -0.34
CPNE1-201ENST00000317677 PRSS36Q5K4E3 855 aa12.96□□□□□ -0.34
CPNE1-201ENST00000317677 ATG16L1Q676U5 607 aa12.96□□□□□ -0.34
CPNE1-201ENST00000317677 NANOGP8Q6NSW7 305 aa12.96□□□□□ -0.34
CPNE1-201ENST00000317677 KIAA0408Q6ZU52 694 aa12.96□□□□□ -0.34
CPNE1-201ENST00000317677 CMTM8Q8IZV2 173 aa12.96□□□□□ -0.34
CPNE1-201ENST00000317677 FBXW8Q8N3Y1 598 aa12.96□□□□□ -0.34
CPNE1-201ENST00000317677 POU5F2Q8N7G0 328 aa12.96□□□□□ -0.34
CPNE1-201ENST00000317677 LPCAT1Q8NF37 534 aa12.96□□□□□ -0.34
CPNE1-201ENST00000317677 ADAMTS16Q8TE57 1224 aa12.96□□□□□ -0.34
CPNE1-201ENST00000317677 CNBD2Q96M20 576 aa12.96□□□□□ -0.34
CPNE1-201ENST00000317677 ZSWIM3Q96MP5 696 aa12.96□□□□□ -0.34
CPNE1-201ENST00000317677 GID8Q9NWU2 228 aa12.96□□□□□ -0.34
CPNE1-201ENST00000317677 TRNAU1APQ9NX07 287 aaKnown RBP12.96□□□□□ -0.34
CPNE1-201ENST00000317677 SCN8AQ9UQD0 1980 aa12.95□□□□□ -0.34
CPNE1-201ENST00000317677 CDH23Q9H251 3354 aa12.95□□□□□ -0.34
CPNE1-201ENST00000317677 CUL9Q8IWT3 2517 aa12.95□□□□□ -0.34
CPNE1-201ENST00000317677 TMEM114B3SHH9 223 aa12.95□□□□□ -0.34
CPNE1-201ENST00000317677 AQP9O43315 295 aa12.95□□□□□ -0.34
CPNE1-201ENST00000317677 FZD6O60353 706 aa12.95□□□□□ -0.34
CPNE1-201ENST00000317677 ZNF821O75541 412 aaPredicted RBP12.95□□□□□ -0.34
CPNE1-201ENST00000317677 H6PDO95479 791 aa12.95□□□□□ -0.34
CPNE1-201ENST00000317677 GOT2P00505 430 aaKnown RBP12.95□□□□□ -0.34
CPNE1-201ENST00000317677 PFKLP17858 780 aa12.95□□□□□ -0.34
CPNE1-201ENST00000317677 HADHAP40939 763 aa12.95□□□□□ -0.34
CPNE1-201ENST00000317677 RAB10P61026 200 aa12.95□□□□□ -0.34
CPNE1-201ENST00000317677 MPPE1Q53F39 396 aa12.95□□□□□ -0.34
CPNE1-201ENST00000317677 MPP7Q5T2T1 576 aa12.95□□□□□ -0.34
CPNE1-201ENST00000317677 AMIGO2Q86SJ2 522 aa12.95□□□□□ -0.34
CPNE1-201ENST00000317677 SPATA6LQ8N4H0 392 aa12.95□□□□□ -0.34
CPNE1-201ENST00000317677 OR6P1Q8NGX9 317 aa12.95□□□□□ -0.34
CPNE1-201ENST00000317677 FIBINQ8TAL6 211 aa12.95□□□□□ -0.34
CPNE1-201ENST00000317677 ZNF707Q96C28 371 aaPredicted RBP12.95□□□□□ -0.34
CPNE1-201ENST00000317677 ELMO2Q96JJ3 720 aa12.95□□□□□ -0.34
CPNE1-201ENST00000317677 PSD2Q9BQI7 771 aa12.95□□□□□ -0.34
CPNE1-201ENST00000317677 NCKIPSDQ9NZQ3 722 aa12.95□□□□□ -0.34
CPNE1-201ENST00000317677 RIMKLBQ9ULI2 386 aa12.95□□□□□ -0.34
CPNE1-201ENST00000317677 HEMK1Q9Y5R4 338 aaPredicted RBP12.95□□□□□ -0.34
CPNE1-201ENST00000317677 TYW5A2RUC4 315 aaKnown RBP12.94□□□□□ -0.34
CPNE1-201ENST00000317677 TARM1B6A8C7 271 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 TK2O00142 265 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 RPP40O75818 363 aaKnown RBP12.94□□□□□ -0.34
CPNE1-201ENST00000317677 WISP3O95389 354 aaPredicted RBP12.94□□□□□ -0.34
CPNE1-201ENST00000317677 TFPTP0C1Z6 253 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 PSMA3P25788 255 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 CTSOP43234 321 aaPredicted RBP12.94□□□□□ -0.34
CPNE1-201ENST00000317677 RHOAP61586 193 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 SLC25A3Q00325 362 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 TIAL1Q01085 375 aaKnown RBP eCLIP12.94□□□□□ -0.341e-6■■■■■ 29.1
CPNE1-201ENST00000317677 ADGRE1Q14246 886 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 PLEKHG6Q3KR16 790 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 ZBED5Q49AG3 693 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 ZNF549Q6P9A3 640 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 NAPRTQ6XQN6 538 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 CYP2U1Q7Z449 544 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 ADGRD2Q7Z7M1 963 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 GALNT7Q86SF2 657 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 TMEM25Q86YD3 366 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 TERB1Q8NA31 727 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 ANKK1Q8NFD2 765 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 ZNF420Q8TAQ5 688 aaPredicted RBP12.94□□□□□ -0.34
CPNE1-201ENST00000317677 TBC1D15Q8TC07 691 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 STYXQ8WUJ0 223 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 TRUB1Q8WWH5 349 aaKnown RBP12.94□□□□□ -0.34
CPNE1-201ENST00000317677 PEX13Q92968 403 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 RMDN1Q96DB5 314 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 CCDC138Q96M89 665 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 SORT1Q99523 831 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 DOK1Q99704 481 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 TM6SF2Q9BZW4 377 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 TASP1Q9H6P5 420 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 LIN28AQ9H9Z2 209 aaKnown RBP12.94□□□□□ -0.34
CPNE1-201ENST00000317677 CERS4Q9HA82 394 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 NLE1Q9NVX2 485 aaPredicted RBP12.94□□□□□ -0.34
CPNE1-201ENST00000317677 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.94□□□□□ -0.34
CPNE1-201ENST00000317677 SLC30A1Q9Y6M5 507 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 H3BNH8 94 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 CES1P23141 567 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 HLA-FP30511 346 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 HOXA9P31269 272 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 GKP32189 559 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 GLRBP48167 497 aa12.94□□□□□ -0.34
CPNE1-201ENST00000317677 POLD2P49005 469 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms