RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 RALGPS2Q86X27 583 aaPredicted RBP13.33□□□□□ -0.28
SKA3-202ENST00000314759 ARRDC2Q8TBH0 407 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 ZC3H15Q8WU90 426 aaKnown RBP13.33□□□□□ -0.28
SKA3-202ENST00000314759 HPS1Q92902 700 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 CDCA5Q96FF9 252 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 ZNF599Q96NL3 588 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 TINF2Q9BSI4 451 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 TRIM62Q9BVG3 475 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 LTB4R2Q9NPC1 389 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 GMIPQ9P107 970 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 B3GNT3Q9Y2A9 372 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 CCDC162PA2VCL2 907 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 KERAO60938 352 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 ALPLP05186 524 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 PRSS56P0CW18 603 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 NFKBIAP25963 317 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 ALDH3A2P51648 485 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 EMX2Q04743 252 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 GRIK2Q13002 908 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 PRAMEF19Q5SWL8 479 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 BROXQ5VW32 411 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 GLYATQ6IB77 296 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 PROSER1Q86XN7 944 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 UMODL1-AS1Q8N2C9 162 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 PGBD5Q8N414 524 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 FBXO39Q8N4B4 442 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 SCAIQ8N9R8 606 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 OR2T11Q8NH01 316 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 PSMG2Q969U7 264 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 KIAA1191Q96A73 305 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 SH3YL1Q96HL8 342 aaPredicted RBP13.33□□□□□ -0.28
SKA3-202ENST00000314759 ACOX2Q99424 681 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 ACBD6Q9BR61 282 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 BRINP2Q9C0B6 783 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 ING2Q9H160 280 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 ATAD3AQ9NVI7 634 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 GIT1Q9Y2X7 761 aa13.33□□□□□ -0.28
SKA3-202ENST00000314759 DICER1Q9UPY3 1922 aaKnown RBP13.32□□□□□ -0.28
SKA3-202ENST00000314759 PLXNB2O15031 1838 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 LOC285095A0A1B0GVY8 99 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 TYW5A2RUC4 315 aaKnown RBP13.32□□□□□ -0.28
SKA3-202ENST00000314759 WASH4PA8MWX3 477 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 TOR1BO14657 336 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 RCVRNP35243 200 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 MRPL19P49406 292 aaKnown RBP13.32□□□□□ -0.28
SKA3-202ENST00000314759 PLA2G16P53816 162 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 ACVR1Q04771 509 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 CRY1Q16526 586 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 SYVN1Q86TM6 617 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 OR13C4Q8NGS5 318 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 STAG3L4Q8TBR4 150 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 BLOC1S5Q8TDH9 187 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 RAB2BQ8WUD1 216 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 TMBIM1Q969X1 311 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 ISG20Q96AZ6 181 aaKnown RBP13.32□□□□□ -0.28
SKA3-202ENST00000314759 PKMYT1Q99640 499 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 LRRC3Q9BY71 257 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 GPN2Q9H9Y4 310 aaPredicted RBP13.32□□□□□ -0.28
SKA3-202ENST00000314759 NMUR1Q9HB89 426 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 RNF112Q9ULX5 631 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 A8MU76 341 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 KPNA4O00629 521 aaPredicted RBP13.32□□□□□ -0.28
SKA3-202ENST00000314759 ABCB7O75027 752 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 JRKO75564 520 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 CNTN5O94779 1100 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 ENO2P09104 434 aaPredicted RBP13.32□□□□□ -0.28
SKA3-202ENST00000314759 PABPC1P11940 636 aaKnown RBP13.32□□□□□ -0.28
SKA3-202ENST00000314759 PCNAP12004 261 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 CRHBPP24387 322 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 HPCAL1P37235 193 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 AGTR2P50052 363 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 SCNN1GP51170 649 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 RAD23AP54725 363 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 TUBA3CQ13748 450 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 UPP1Q16831 310 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 SETMARQ53H47 684 aaPredicted RBP13.32□□□□□ -0.28
SKA3-202ENST00000314759 XKR7Q5GH72 579 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 ANKS6Q68DC2 871 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 MRNIPQ6NTE8 343 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 PAQR3Q6TCH7 311 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 R3HCC1LQ7Z5L2 792 aaKnown RBP13.32□□□□□ -0.28
SKA3-202ENST00000314759 GPR150Q8NGU9 434 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 OR10T2Q8NGX3 314 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 PROKR1Q8TCW9 393 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 TADA1Q96BN2 335 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 NSMCE2Q96MF7 247 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 AARSD1Q9BTE6 412 aaKnown RBP13.32□□□□□ -0.28
SKA3-202ENST00000314759 MROQ9BYG7 248 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 ADNPQ9H2P0 1102 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 RAD21L1Q9H4I0 556 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 POPDC3Q9HBV1 291 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 PCDH12Q9NPG4 1184 aa13.32□□□□□ -0.28
SKA3-202ENST00000314759 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.32□□□□□ -0.28
SKA3-202ENST00000314759 DNMT3BQ9UBC3 853 aaKnown RBP13.32□□□□□ -0.28
SKA3-202ENST00000314759 ARL5CA6NH57 179 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 ENPP3O14638 875 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 XYLBO75191 536 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 ECI2O75521 394 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 PRSS23O95084 383 aa13.31□□□□□ -0.28
SKA3-202ENST00000314759 RPS17P08708 135 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms