RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 TCF12Q99081 682 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 POPDC3Q9HBV1 291 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 SLAMF8Q9P0V8 285 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 PCTPQ9UKL6 214 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 CNOT6Q9ULM6 557 aaKnown RBP11.43□□□□□ -0.58
PTPN2-201ENST00000309660 VPS9D1Q9Y2B5 631 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 ANGPTL3Q9Y5C1 460 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 PDLIM1O00151 329 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 CAPN1P07384 714 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 FGF4P08620 206 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 HSPA7P48741 367 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 ACADVLP49748 655 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 HTR6P50406 440 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 PLOD1Q02809 727 aaPredicted RBP11.43□□□□□ -0.58
PTPN2-201ENST00000309660 NR6A1Q15406 480 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 ALG1LQ6GMV1 187 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 KRT80Q6KB66 452 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 SLC15A3Q8IY34 581 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 PXYLP1Q8TE99 480 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 EID2BQ96D98 161 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 MYO19Q96H55 970 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 SLC29A1Q99808 456 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 SMG9Q9H0W8 520 aaKnown RBP11.43□□□□□ -0.58
PTPN2-201ENST00000309660 TMEM181Q9P2C4 612 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 ZNF225Q9UK10 706 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 TBC1D30Q9Y2I9 924 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 OAS3Q9Y6K5 1087 aaKnown RBP11.43□□□□□ -0.58
PTPN2-201ENST00000309660 A0A1B0GTW7 788 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 PRMT5O14744 637 aaPredicted RBP11.43□□□□□ -0.58
PTPN2-201ENST00000309660 SEC24DO94855 1032 aaPredicted RBP11.43□□□□□ -0.58
PTPN2-201ENST00000309660 CLDN7O95471 211 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 S100BP04271 92 aaPredicted RBP11.43□□□□□ -0.58
PTPN2-201ENST00000309660 IDO1P14902 403 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 MTA1Q13330 715 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 BTG3Q14201 252 aaPredicted RBP11.43□□□□□ -0.58
PTPN2-201ENST00000309660 AARS2Q5JTZ9 985 aaKnown RBP11.43□□□□□ -0.58
PTPN2-201ENST00000309660 SERPINA9Q86WD7 417 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 LRRC58Q96CX6 371 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 PLEKHG4BQ96PX9 1271 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 TRAPPC9Q96Q05 1148 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 C17orf80Q9BSJ5 609 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 KLF16Q9BXK1 252 aaPredicted RBP11.43□□□□□ -0.58
PTPN2-201ENST00000309660 NSUN3Q9H649 340 aaKnown RBP11.43□□□□□ -0.58
PTPN2-201ENST00000309660 CAAP1Q9H8G2 361 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 GID8Q9NWU2 228 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 COMMD8Q9NX08 183 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 CRLS1Q9UJA2 301 aa11.43□□□□□ -0.58
PTPN2-201ENST00000309660 RNF103-CHMP3A0A140T963 221 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 CCDC154A6NI56 674 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 ESRRBO95718 433 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 F11P03951 625 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 URODP06132 367 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 GABRR2P28476 465 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 ZXDBP98169 803 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 CNPY1Q3B7I2 92 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 NCEH1Q6PIU2 408 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 OR2T11Q8NH01 316 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 SLCO4A1Q96BD0 722 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 SEPHS2Q99611 448 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 TMEM79Q9BSE2 394 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 RNF208Q9H0X6 261 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 ZNF334Q9HCZ1 680 aaPredicted RBP11.42□□□□□ -0.58
PTPN2-201ENST00000309660 LHX3Q9UBR4 397 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 USP22Q9UPT9 525 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 C7orf72A4D263 438 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 TSPAN12O95859 305 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 PENKP01210 267 aaPredicted RBP11.42□□□□□ -0.58
PTPN2-201ENST00000309660 RPS17P08708 135 aaKnown RBP11.42□□□□□ -0.58
PTPN2-201ENST00000309660 HMOX2P30519 316 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 GGT5P36269 586 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 EPHB3P54753 998 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 HTRA3P83110 453 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 BCL2L1Q07817 233 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 CYP51A1Q16850 503 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 AAK1Q2M2I8 961 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.42□□□□□ -0.58
PTPN2-201ENST00000309660 ATP6AP1LQ52LC2 224 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 PAGE3Q5JUK9 113 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 LETMD1Q6P1Q0 360 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 DNAJC14Q6Y2X3 702 aaPredicted RBP11.42□□□□□ -0.58
PTPN2-201ENST00000309660 CHST9Q7L1S5 443 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 TTC30BQ8N4P2 665 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 OR2T34Q8NGX1 318 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 OR2T3Q8NH03 318 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 ZFYVE1Q9HBF4 777 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 SDR39U1Q9NRG7 319 aaPredicted RBP11.42□□□□□ -0.58
PTPN2-201ENST00000309660 CMTM6Q9NX76 183 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 CLEC4EQ9ULY5 219 aa11.42□□□□□ -0.58
PTPN2-201ENST00000309660 SLC22A3O75751 556 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 SLC25A14O95258 325 aaPredicted RBP11.41□□□□□ -0.58
PTPN2-201ENST00000309660 MLYCDO95822 493 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 FAM58BPP0C7Q3 252 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 CA5AP35218 305 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 PLXNA3P51805 1871 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 ERVPABLB-1P60509 514 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 TLE2Q04725 743 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 C5orf22Q49AR2 442 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 RALGPS2Q86X27 583 aaPredicted RBP11.41□□□□□ -0.58
PTPN2-201ENST00000309660 PHYKPLQ8IUZ5 450 aa11.41□□□□□ -0.58
PTPN2-201ENST00000309660 SLAIN1Q8ND83 568 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms