RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 CTBSQ01459 385 aa8.98□□□□□ -0.97
PDE4D-201ENST00000309641 CACNG1Q06432 222 aa8.98□□□□□ -0.97
PDE4D-201ENST00000309641 PDIA2Q13087 525 aaKnown RBP8.98□□□□□ -0.97
PDE4D-201ENST00000309641 CALCOCO2Q13137 446 aa8.98□□□□□ -0.97
PDE4D-201ENST00000309641 UBAP2Q5T6F2 1119 aaKnown RBP8.98□□□□□ -0.97
PDE4D-201ENST00000309641 CHST15Q7LFX5 561 aaPredicted RBP8.98□□□□□ -0.97
PDE4D-201ENST00000309641 NLRP9Q7RTR0 991 aa8.98□□□□□ -0.97
PDE4D-201ENST00000309641 C11orf96Q7Z7L8 435 aa8.98□□□□□ -0.97
PDE4D-201ENST00000309641 PDIK1LQ8N165 341 aa8.98□□□□□ -0.97
PDE4D-201ENST00000309641 OXR1Q8N573 874 aa8.98□□□□□ -0.97
PDE4D-201ENST00000309641 EID2Q8N6I1 236 aa8.98□□□□□ -0.97
PDE4D-201ENST00000309641 PEX13Q92968 403 aa8.98□□□□□ -0.97
PDE4D-201ENST00000309641 STAMBPL1Q96FJ0 436 aa8.98□□□□□ -0.97
PDE4D-201ENST00000309641 EBNA1BP2Q99848 306 aaKnown RBP8.98□□□□□ -0.97
PDE4D-201ENST00000309641 VPS18Q9P253 973 aa8.98□□□□□ -0.97
PDE4D-201ENST00000309641 KCNK6Q9Y257 313 aa8.98□□□□□ -0.97
PDE4D-201ENST00000309641 PRSS21Q9Y6M0 314 aa8.98□□□□□ -0.97
PDE4D-201ENST00000309641 IGLV3-16A0A075B6K0 115 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 GIPC1O14908 333 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 GRID2O43424 1007 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 DFNA5O60443 496 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 FOXD2O60548 495 aaPredicted RBP8.97□□□□□ -0.97
PDE4D-201ENST00000309641 EML2O95834 649 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 ACP5P13686 325 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 ECHS1P30084 290 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 AKT1P31749 480 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 CARSP49589 748 aaKnown RBP8.97□□□□□ -0.97
PDE4D-201ENST00000309641 LIMK1P53667 647 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 LAMB3Q13751 1172 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 CRYMQ14894 314 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 GPR33Q49SQ1 333 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 ZNF789Q5FWF6 425 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 LDLRAP1Q5SW96 308 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 KIAA0930Q6ICG6 404 aaPredicted RBP8.97□□□□□ -0.97
PDE4D-201ENST00000309641 TRMT10BQ6PF06 316 aaKnown RBP8.97□□□□□ -0.97
PDE4D-201ENST00000309641 SLC30A9Q6PML9 568 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 TMEM220Q6QAJ8 160 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 AFTPHQ6ULP2 937 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 GALNT13Q8IUC8 556 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 DENND6AQ8IWF6 608 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 FBXO36Q8NEA4 188 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 NETO1Q8TDF5 533 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 SETD7Q8WTS6 366 aaKnown RBP8.97□□□□□ -0.97
PDE4D-201ENST00000309641 CFAP36Q96G28 342 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 TTC25Q96NG3 672 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 OR2M4Q96R27 311 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 SPATS2LQ9NUQ6 558 aaKnown RBP8.97□□□□□ -0.97
PDE4D-201ENST00000309641 SLC17A6Q9P2U8 582 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 SPASTQ9UBP0 616 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 GULP1Q9UBP9 304 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 PIKFYVEQ9Y2I7 2098 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 MAGEB16A2A368 324 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 DCDC2BA2VCK2 349 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 LMO7DNF2Z398 122 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 H3BM21 787 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 CASC3O15234 703 aaKnown RBP8.97□□□□□ -0.97
PDE4D-201ENST00000309641 CD3EAPO15446 510 aaKnown RBP8.97□□□□□ -0.97
PDE4D-201ENST00000309641 SIGLEC6O43699 453 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 VEGFDO43915 354 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 CBFA2T3O75081 653 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 USP1O94782 785 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 ERVK-10P10266 1014 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 PGAM1P18669 254 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 MSH3P20585 1137 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 BLKP51451 505 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 SLC14A1Q13336 389 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 DNAJC21Q5F1R6 531 aaKnown RBP8.97□□□□□ -0.97
PDE4D-201ENST00000309641 XKR5Q6UX68 686 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 UNC5AQ6ZN44 842 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 CAPN12Q6ZSI9 719 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 TAF8Q7Z7C8 310 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 PIP4P1Q86T03 277 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 CCDC25Q86WR0 208 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 TRAPPC5Q8IUR0 188 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 NAXDQ8IW45 347 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 ZBED8Q8IZ13 594 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 LILRA3Q8N6C8 439 aaPredicted RBP8.97□□□□□ -0.97
PDE4D-201ENST00000309641 BBOF1Q8ND07 529 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 DEFB124Q8NES8 71 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 RHBDD1Q8TEB9 315 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 PATE1Q8WXA2 126 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 IFT81Q8WYA0 676 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 COPS8Q99627 209 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 SAYSD1Q9NPB0 183 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 CATSPERZQ9NTU4 200 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 TRNAU1APQ9NX07 287 aaKnown RBP8.97□□□□□ -0.97
PDE4D-201ENST00000309641 ZDHHC3Q9NYG2 299 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 FAM8A1Q9UBU6 413 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 ZC3H7BQ9UGR2 993 aaKnown RBP8.97□□□□□ -0.97
PDE4D-201ENST00000309641 CDV3Q9UKY7 258 aaKnown RBP8.97□□□□□ -0.97
PDE4D-201ENST00000309641 PCOLCE2Q9UKZ9 415 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 DNAJC16Q9Y2G8 782 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 FAM169AQ9Y6X4 670 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 ASXL3Q9C0F0 2248 aa8.97□□□□□ -0.97
PDE4D-201ENST00000309641 ZFC3H1O60293 1989 aaKnown RBP8.96□□□□□ -0.97
PDE4D-201ENST00000309641 LY6G6EA0A0G2JKS1 128 aa8.96□□□□□ -0.98
PDE4D-201ENST00000309641 IQCF5A8MTL0 148 aa8.96□□□□□ -0.98
PDE4D-201ENST00000309641 SMAPO00193 183 aa8.96□□□□□ -0.98
PDE4D-201ENST00000309641 SLC30A4O14863 429 aa8.96□□□□□ -0.98
PDE4D-201ENST00000309641 POLBP06746 335 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms