RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 STN1Q9H668 368 aaKnown RBP10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 VPS37BQ9H9H4 285 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CHRAC1Q9NRG0 131 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ZDHHC3Q9NYG2 299 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 TAAR2Q9P1P5 351 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 SLC2A6Q9UGQ3 507 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 SOX13Q9UN79 622 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 UTP11Q9Y3A2 253 aaKnown RBP10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 PRKAB1Q9Y478 270 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 LAMA1P25391 3075 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 FRYLO94915 3013 aa10.86□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CCDC162PA2VCL2 907 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 OR51F1A6NGY5 319 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 SDR42E2A6NKP2 422 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 OR2AG2A6NM03 316 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 F8W8V4 182 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 QSOX1O00391 747 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CHUKO15111 745 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 RAD51CO43502 376 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 SNX2O60749 519 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 TRIM16O95361 564 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 FUCA1P04066 466 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CDK4P11802 303 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CKMT1AP12532 417 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ZNF7P17097 686 aaPredicted RBP10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ACP1P24666 158 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 PBLDP30039 288 aaPredicted RBP10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 FOXN2P32314 431 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ACADVLP49748 655 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ARSDP51689 593 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ACVR1Q04771 509 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CALCOCO2Q13137 446 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ILKQ13418 452 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ITIH4Q14624 930 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 KHDC1Q4VXA5 237 aaKnown RBP10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 C8orf74Q6P047 294 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CERS6Q6ZMG9 384 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ERMP1Q7Z2K6 904 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CAND1Q86VP6 1230 aaKnown RBP10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 SERPINA9Q86WD7 417 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 SLC35F3Q8IY50 421 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 KYQ8NBH2 561 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 OR6C4Q8NGE1 309 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 OR4L1Q8NH43 312 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 IFI44Q8TCB0 444 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ZNF669Q96BR6 464 aaPredicted RBP10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 KIFC1Q9BW19 673 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 KLC4Q9NSK0 619 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CATSPERZQ9NTU4 200 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 TMPRSS11EQ9UL52 423 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 KCNK6Q9Y257 313 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 PCDHGA1Q9Y5H4 931 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 MRFAP1Q9Y605 127 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 MAD1L1Q9Y6D9 718 aa10.85□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 RP1P56715 2156 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 TRBV5-4A0A0C4DH59 114 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 MAGEB16A2A368 324 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CPED1A4D0V7 1026 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CTAGE15A4D2H0 777 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 KLHL33A6NCF5 533 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 AGAP14A8MT82 685 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 PFDN6O15212 129 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 KCNJ13O60928 360 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 AVILO75366 819 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 SEC31AO94979 1220 aaKnown RBP10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CTAGE8P0CG41 777 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ATP1B2P14415 290 aaPredicted RBP10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 PSMA3P25788 255 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 NMBRP28336 390 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ITGA8P53708 1063 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ARL4CP56559 192 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 C14orf28Q4W4Y0 310 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 FNBP1LQ5T0N5 605 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 TMEM220Q6QAJ8 160 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 EFL1Q7Z2Z2 1120 aaKnown RBP10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CTAGE6Q86UF2 777 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 NRROSQ86YC3 692 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CTAGE4Q8IX94 777 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 PDIK1LQ8N165 341 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 MPP5Q8N3R9 675 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CEP112Q8N8E3 955 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 RASGEF1AQ8N9B8 481 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 GABPB2Q8TAK5 448 aaPredicted RBP10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 MAPK15Q8TD08 544 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 MFSD3Q96ES6 412 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 ZNF778Q96MU6 729 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 DPH5Q9H2P9 285 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 TREX1Q9NSU2 369 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 PADI4Q9UM07 663 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 DNAJC16Q9Y2G8 782 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 PLEKHM1Q9Y4G2 1056 aa10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 PCYT1BQ9Y5K3 369 aaPredicted RBP10.84□□□□□ -0.67
CSPG4P2Y-201ENST00000306853 CFAP54Q96N23 3096 aa10.83□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 CNOT1A5YKK6 2376 aaKnown RBP10.83□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 FAM237BA0A1B0GVD1 139 aa10.83□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 EME2A4GXA9 379 aaPredicted RBP10.83□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 PDZK1P1A8MUH7 402 aa10.83□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 ZW10O43264 779 aa10.83□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 USP1O94782 785 aa10.83□□□□□ -0.68
CSPG4P2Y-201ENST00000306853 VAPBO95292 243 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms