RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 ADGRD2Q7Z7M1 963 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 MYLK4Q86YV6 388 aaPredicted RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 DSELQ8IZU8 1212 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 PCDH20Q8N6Y1 951 aaKnown RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 SNX31Q8N9S9 440 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 ZNF483Q8TF39 744 aaPredicted RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 FRS2Q8WU20 508 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 CYB5D2Q8WUJ1 264 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 RCN3Q96D15 328 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 C19orf60Q96EN9 201 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 GIMAP2Q9UG22 337 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 MBD1Q9UIS9 605 aaPredicted RBP6.48□□□□□ -1.37
USP47-201ENST00000305481 APPL1Q9UKG1 709 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 PCTPQ9UKL6 214 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 TMPRSS11EQ9UL52 423 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 PCDHB1Q9Y5F3 818 aa6.48□□□□□ -1.37
USP47-201ENST00000305481 ANKRD12Q6UB98 2062 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 SOBPA7XYQ1 873 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 SYCE1LA8MT33 242 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 STX16-NPEPL1H3BU86 382 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 E2F3O00716 465 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 STX16O14662 325 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 UBDO15205 165 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 ALDOCP09972 364 aaKnown RBP6.47□□□□□ -1.37
USP47-201ENST00000305481 ZNF7P17097 686 aaPredicted RBP6.47□□□□□ -1.37
USP47-201ENST00000305481 DPP6P42658 865 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 NUDT2P50583 147 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 B4GALNT1Q00973 533 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 MESP2Q0VG99 397 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 TBL3Q12788 808 aaKnown RBP6.47□□□□□ -1.37
USP47-201ENST00000305481 LCP2Q13094 533 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 HERC3Q15034 1050 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 TGFBIQ15582 683 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 TRMT5Q32P41 509 aaKnown RBP6.47□□□□□ -1.37
USP47-201ENST00000305481 C1orf146Q5VVC0 180 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 GRAMD4Q6IC98 578 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 ELMSAN1Q6PJG2 1045 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 GPSM1Q86YR5 675 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 PHYKPLQ8IUZ5 450 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 RBFAQ8N0V3 343 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 PAF1Q8N7H5 531 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 C12orf76Q8N812 135 aaPredicted RBP6.47□□□□□ -1.37
USP47-201ENST00000305481 DTX3LQ8TDB6 740 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 TACO1Q9BSH4 297 aaKnown RBP6.47□□□□□ -1.37
USP47-201ENST00000305481 CLPBQ9H078 707 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 ABCG8Q9H221 673 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 MTG2Q9H4K7 406 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 BRD9Q9H8M2 597 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 AKTIPQ9H8T0 292 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 UTP6Q9NYH9 597 aaKnown RBP6.47□□□□□ -1.37
USP47-201ENST00000305481 MARK1Q9P0L2 795 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 TBC1D14Q9P2M4 693 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 TSR3Q9UJK0 312 aaKnown RBP6.47□□□□□ -1.37
USP47-201ENST00000305481 SLC25A13Q9UJS0 675 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 ERVW-1Q9UQF0 538 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 WASF2Q9Y6W5 498 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 TTC34A8MYJ7 566 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 WASH3PC4AMC7 463 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 AZIN1O14977 448 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 PIP5K1BO14986 540 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 XYLBO75191 536 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 SLC25A14O95258 325 aaPredicted RBP6.47□□□□□ -1.37
USP47-201ENST00000305481 LMNAP02545 664 aaKnown RBP6.47□□□□□ -1.37
USP47-201ENST00000305481 C1SP09871 688 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 EZRP15311 586 aaKnown RBP6.47□□□□□ -1.37
USP47-201ENST00000305481 TCF3P15923 654 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 ITGALP20701 1170 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 WEE1P30291 646 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 SPAM1P38567 509 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 MTTPP55157 894 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 CCNIQ14094 377 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 GPRC6AQ5T6X5 926 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 ANKS6Q68DC2 871 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 PTRHD1Q6GMV3 140 aaKnown RBP6.47□□□□□ -1.37
USP47-201ENST00000305481 GK5Q6ZS86 529 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 SYVN1Q86TM6 617 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 NXPE1Q8N323 547 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 FBXW8Q8N3Y1 598 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 KYQ8NBH2 561 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 LEMD2Q8NC56 503 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 TWIST2Q8WVJ9 160 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 DLG3Q92796 817 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 ZNF641Q96N77 438 aaPredicted RBP6.47□□□□□ -1.37
USP47-201ENST00000305481 ASB2Q96Q27 587 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 ZDHHC7Q9NXF8 308 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 STX18Q9P2W9 335 aaKnown RBP6.47□□□□□ -1.37
USP47-201ENST00000305481 FBXO10Q9UK96 956 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 ADAMTS6Q9UKP5 1117 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 PACSIN3Q9UKS6 424 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 POMPQ9Y244 141 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 PLXNB3Q9ULL4 1909 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 FBP2O00757 339 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 CA3P07451 260 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 CTSLP07711 333 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 CISD3P0C7P0 127 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 GCKP35557 465 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 GRB7Q14451 532 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 GPR33Q49SQ1 333 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 ATP13A5Q4VNC0 1218 aa6.47□□□□□ -1.37
USP47-201ENST00000305481 TCEAL5Q5H9L2 206 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms