RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 EVPLLA8MZ36 301 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 PPP6CO00743 305 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 IQCF3P0C7M6 154 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 ATP4BP51164 291 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 NCS1P62166 190 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 SF3B4Q15427 424 aaKnown RBP eCLIP12.93□□□□□ -0.34
TRIM35-201ENST00000305364 CRY1Q16526 586 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 FAM219BQ5XKK7 198 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 C2CD4AQ8NCU7 369 aaPredicted RBP12.93□□□□□ -0.34
TRIM35-201ENST00000305364 OR10Q1Q8NGQ4 319 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 MAELQ96JY0 434 aaKnown RBP12.93□□□□□ -0.34
TRIM35-201ENST00000305364 GPN2Q9H9Y4 310 aaPredicted RBP12.93□□□□□ -0.34
TRIM35-201ENST00000305364 TEKT2Q9UIF3 430 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 FBXW11Q9UKB1 542 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 PCDHGA8Q9Y5G5 932 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 GOLGA8CPA6NN73 597 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 H3BRB1 525 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 VPS26AO75436 327 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 ITGBL1O95965 494 aaPredicted RBP12.93□□□□□ -0.34
TRIM35-201ENST00000305364 HMBSP08397 361 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 DNAJB1P25685 340 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 APLP1P51693 650 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 DGKQP52824 942 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 CTBSQ01459 385 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 RFX4Q33E94 735 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 PAN2Q504Q3 1202 aaKnown RBP12.93□□□□□ -0.34
TRIM35-201ENST00000305364 INTS6LQ5JSJ4 861 aaKnown RBP12.93□□□□□ -0.34
TRIM35-201ENST00000305364 GPRIN3Q6ZVF9 776 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 DET1Q7L5Y6 550 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 BTLAQ7Z6A9 289 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 FUNDC1Q8IVP5 155 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 STX19Q8N4C7 294 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 PTCD2Q8WV60 388 aaKnown RBP12.93□□□□□ -0.34
TRIM35-201ENST00000305364 AURKBQ96GD4 344 aaPredicted RBP12.93□□□□□ -0.34
TRIM35-201ENST00000305364 TPK1Q9H3S4 243 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 NEK6Q9HC98 313 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 MAP10Q9P2G4 905 aa12.93□□□□□ -0.34
TRIM35-201ENST00000305364 POLR3HQ9Y535 204 aaPredicted RBP12.93□□□□□ -0.34
TRIM35-201ENST00000305364 SOBPA7XYQ1 873 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 AIREO43918 545 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 TSPAN1O60635 241 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 C1RP00736 705 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 SBK3P0C264 359 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 RUNX1T1Q06455 604 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 FOXM1Q08050 763 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 CD47Q08722 323 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 UNC50Q53HI1 259 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 ZRANB3Q5FWF4 1079 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 TSTD2Q5T7W7 516 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 CACHD1Q5VU97 1274 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 HS3ST5Q8IZT8 346 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 NDNFQ8TB73 568 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 ANKRD49Q8WVL7 239 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 CITED4Q96RK1 184 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 UHRF1Q96T88 793 aaPredicted RBP12.92□□□□□ -0.34
TRIM35-201ENST00000305364 DCSTAMPQ9H295 470 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 RERGLQ9H628 205 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 FAM118AQ9NWS6 357 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 USP22Q9UPT9 525 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 WBP11Q9Y2W2 641 aaKnown RBP12.92□□□□□ -0.34
TRIM35-201ENST00000305364 CDK5RAP2Q96SN8 1893 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 SAGE2PA6NJ88 616 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 SH3BP5O60239 455 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 ARIH2O95376 493 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 GUCA1CO95843 209 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 RPL38P63173 70 aaKnown RBP12.92□□□□□ -0.34
TRIM35-201ENST00000305364 LAPTM4AQ15012 233 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 OXA1LQ15070 435 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 MAGEE1Q9HCI5 957 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 SOWAHBA6NEL2 793 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 PRKD3O94806 890 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 SLC25A27O95847 323 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 LGALS2P05162 132 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 CRHBPP24387 322 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 GRSF1Q12849 480 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRIM35-201ENST00000305364 CCDC85BQ15834 202 aaPredicted RBP12.92□□□□□ -0.34
TRIM35-201ENST00000305364 ARMCX4Q5H9R4 360 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 NOL9Q5SY16 702 aaKnown RBP12.92□□□□□ -0.34
TRIM35-201ENST00000305364 SPRED1Q7Z699 444 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 AADATQ8N5Z0 425 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 UBASH3BQ8TF42 649 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 EFHD2Q96C19 240 aaPredicted RBP12.92□□□□□ -0.34
TRIM35-201ENST00000305364 ZNF385DQ9H6B1 395 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 PDGFCQ9NRA1 345 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 IMPAD1Q9NX62 359 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRIM35-201ENST00000305364 ZNF112Q9UJU3 913 aa12.92□□□□□ -0.34
TRIM35-201ENST00000305364 FAM47E-STBD1D6RA91 191 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 FFAR3O14843 346 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 GPR42O15529 346 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 OR4F21O95013 312 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 CHRNA1P02708 482 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 HTR1BP28222 390 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 GTF2E2P29084 291 aaKnown RBP12.91□□□□□ -0.34
TRIM35-201ENST00000305364 SCNN1AP37088 669 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 AIF1P55008 147 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 FOXA1P55317 472 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 FPGSQ05932 587 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 GALNT2Q10471 571 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 PAGE3Q5JUK9 113 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms