RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 THEGLP0DJG4 465 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 ATP1B2P14415 290 aaPredicted RBP9.36□□□□□ -0.91
RFX3-201ENST00000302303 RPS3P23396 243 aaKnown RBP eCLIP9.36□□□□□ -0.91
RFX3-201ENST00000302303 RABIFP47224 123 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 TTPAP49638 278 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 CASP8Q14790 479 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 RASA2Q15283 850 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 LPAL2Q16609 132 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 ALG11Q2TAA5 492 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 WDR45BQ5MNZ6 344 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 LYPLAL1Q5VWZ2 237 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 MACC1Q6ZN28 852 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 SDCCAG8Q86SQ7 713 aaPredicted RBP9.36□□□□□ -0.91
RFX3-201ENST00000302303 IQCHQ86VS3 1027 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 PHYKPLQ8IUZ5 450 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 ZIM3Q96PE6 472 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 PAFAH2Q99487 392 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 RBBP8Q99708 897 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 SLC30A3Q99726 388 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 OLFM1Q99784 485 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 CPNE1Q99829 537 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 MIR1-1HGQ9H1L0 117 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 OR2AG1Q9H205 316 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 TCEAL2Q9H3H9 227 aaPredicted RBP9.36□□□□□ -0.91
RFX3-201ENST00000302303 TM7SF3Q9NS93 570 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 CTNNAL1Q9UBT7 734 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 ZNF180Q9UJW8 692 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 PLAAQ9Y263 795 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 MTO1Q9Y2Z2 717 aaKnown RBP9.36□□□□□ -0.91
RFX3-201ENST00000302303 PRKAB1Q9Y478 270 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 GPR179Q6PRD1 2367 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 FOXO6A8MYZ6 492 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 PATE3B3GLJ2 98 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 POC1B-GALNT4F8VUJ3 575 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 MAP2K7O14733 419 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 PRMT5O14744 637 aaPredicted RBP9.36□□□□□ -0.91
RFX3-201ENST00000302303 TNFRSF10CO14798 259 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 VEGFDO43915 354 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 ERLIN1O75477 346 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 NDUFS3O75489 264 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 CDK14O94921 469 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 FMO4P31512 558 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 GP5P40197 560 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 NSG1P42857 185 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 LIMK2P53671 638 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 CSE1LP55060 971 aaKnown RBP9.36□□□□□ -0.91
RFX3-201ENST00000302303 CDKN2DP55273 166 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 NXPH1P58417 271 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 ZNF844Q08AG5 666 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 OVGP1Q12889 678 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 NAB1Q13506 487 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 SHBQ15464 509 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 BCL7AQ4VC05 210 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 PYCR3Q53H96 274 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 TNFAIP8L3Q5GJ75 292 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 PLA2G2CQ5R387 149 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 GRTP1Q5TC63 336 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 TMEM207Q6UWW9 146 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 SH2D5Q6ZV89 423 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 CEP68Q76N32 757 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 DET1Q7L5Y6 550 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 TDRPQ86YL5 185 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 SYT12Q8IV01 421 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 CEP97Q8IW35 865 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 CTAGE3PQ8IX95 158 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 RGL4Q8IZJ4 473 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 RBFAQ8N0V3 343 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 KRT222Q8N1A0 295 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 LILRA3Q8N6C8 439 aaPredicted RBP9.36□□□□□ -0.91
RFX3-201ENST00000302303 BEND7Q8N7W2 519 aaPredicted RBP9.36□□□□□ -0.91
RFX3-201ENST00000302303 OR56A4Q8NGH8 313 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 GIMAP7Q8NHV1 300 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 FAM174AQ8TBP5 190 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 EPS8L3Q8TE67 593 aaKnown RBP9.36□□□□□ -0.91
RFX3-201ENST00000302303 TSACCQ96A04 125 aaPredicted RBP9.36□□□□□ -0.91
RFX3-201ENST00000302303 ZBTB9Q96C00 473 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 MRRFQ96E11 262 aaKnown RBP9.36□□□□□ -0.91
RFX3-201ENST00000302303 KLHDC7BQ96G42 594 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 PDXPQ96GD0 296 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 VPS39Q96JC1 886 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 LINC00615Q96LM1 132 aaPredicted RBP9.36□□□□□ -0.91
RFX3-201ENST00000302303 NDNQ99608 321 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 GPR22Q99680 433 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 AARSD1Q9BTE6 412 aaKnown RBP9.36□□□□□ -0.91
RFX3-201ENST00000302303 RHOJQ9H4E5 214 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 CAPN10Q9HC96 672 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 FSCN3Q9NQT6 498 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 LATS2Q9NRM7 1088 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 AASDHPPTQ9NRN7 309 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 PHPT1Q9NRX4 125 aaPredicted RBP9.36□□□□□ -0.91
RFX3-201ENST00000302303 CDYLQ9Y232 598 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 PLEKHM1Q9Y4G2 1056 aa9.36□□□□□ -0.91
RFX3-201ENST00000302303 LRP4O75096 1905 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 SPAG17Q6Q759 2223 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 A0A1B0GTW7 788 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 A0A1B0GVT2 93 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 EXOC1LA0A1B0GW35 172 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 PRSS38A1L453 326 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 OR2AG2A6NM03 316 aa9.35□□□□□ -0.91
RFX3-201ENST00000302303 NIPSNAP2O75323 286 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms