RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 LIMD1Q9UGP4 676 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 PCDHA10Q9Y5I2 948 aa14.31□□□□□ -0.12
CDT1-201ENST00000301019 LTBP3Q9NS15 1303 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 SAGE2PA6NJ88 616 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 ATP6V1G2-DDX39BF2Z307 99 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 B4GALT5O43286 388 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 SDHBP21912 280 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 EPHA2P29317 976 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 GPD2P43304 727 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 HTR3AP46098 478 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 USP51Q70EK9 711 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 MILR1Q7Z6M3 343 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 AGBL3Q8NEM8 1001 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 ITFG1Q8TB96 612 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 NCLNQ969V3 563 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 ST6GALNAC4Q9H4F1 302 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 MID1IP1Q9NPA3 183 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 TIGARQ9NQ88 270 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 ABI2Q9NYB9 513 aaPredicted RBP14.3□□□□□ -0.12
CDT1-201ENST00000301019 OPTCQ9UBM4 332 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 MORF4L1Q9UBU8 362 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 TRIM64A6NGJ6 449 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 ZBTB24O43167 697 aaPredicted RBP14.3□□□□□ -0.12
CDT1-201ENST00000301019 EPN2O95208 641 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 NDST3O95803 873 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 SLC10A3P09131 477 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 TGM4P49221 684 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 ATP6V0D1P61421 351 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 GTF2H3Q13889 308 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 CLCA4Q14CN2 919 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 STEAP4Q687X5 459 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 ESRP1Q6NXG1 681 aaKnown RBP14.3□□□□□ -0.12
CDT1-201ENST00000301019 ZC3HC1Q86WB0 502 aaKnown RBP14.3□□□□□ -0.12
CDT1-201ENST00000301019 C19orf60Q96EN9 201 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 CEP19Q96LK0 163 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 CARS2Q9HA77 564 aaKnown RBP14.3□□□□□ -0.12
CDT1-201ENST00000301019 SNX10Q9Y5X0 201 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 FOCADQ5VW36 1801 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 CRCPO75575 148 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 ATG7O95352 703 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 MT-CYBP00156 380 aaPredicted RBP14.3□□□□□ -0.12
CDT1-201ENST00000301019 ALPLP05186 524 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 PSKH1P11801 424 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 ADORA2BP29275 332 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 KCNC1P48547 511 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 SLC9A3P48764 834 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 ZNF404Q494X3 552 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 BOLA3Q53S33 107 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 VARS2Q5ST30 1063 aaKnown RBP14.3□□□□□ -0.12
CDT1-201ENST00000301019 ZNF470Q6ECI4 717 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 LAIR1Q6GTX8 287 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 GLCCI1Q86VQ1 547 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 TRNT1Q96Q11 434 aaKnown RBP14.3□□□□□ -0.12
CDT1-201ENST00000301019 YME1L1Q96TA2 773 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 C1QTNF1Q9BXJ1 281 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 ZNF518BQ9C0D4 1074 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 INTS10Q9NVR2 710 aaKnown RBP14.3□□□□□ -0.12
CDT1-201ENST00000301019 POLR3BQ9NW08 1133 aaPredicted RBP14.3□□□□□ -0.12
CDT1-201ENST00000301019 FBXL12Q9NXK8 326 aa14.3□□□□□ -0.12
CDT1-201ENST00000301019 PSME4Q14997 1843 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 LOC110117498-PIK3R3F6TDL0 507 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 TREHO43280 583 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 PRKCBP05771 671 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 ST13P50502 369 aaKnown RBP14.29□□□□□ -0.12
CDT1-201ENST00000301019 ALDH3A2P51648 485 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 NUDT6P53370 316 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 MVKQ03426 396 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 TUBA3CQ13748 450 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 GOLGA7BQ2TAP0 167 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 PRSS36Q5K4E3 855 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 PIM3Q86V86 326 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 MINDY2Q8NBR6 621 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 MCRS1Q96EZ8 462 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 BARD1Q99728 777 aaKnown RBP14.29□□□□□ -0.12
CDT1-201ENST00000301019 DHRS9Q9BPW9 319 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 IL22Q9GZX6 179 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 EVA1BQ9NVM1 165 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 TRIP11Q15643 1979 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 A0A096LPI6 279 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 AQP12BA6NM10 295 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 A8MT66 165 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 MED7O43513 233 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 TSPAN3O60637 253 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 GPIP06744 558 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 NFICP08651 508 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 CLEC2LP0C7M8 214 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 C21orf33P30042 268 aaPredicted RBP14.29□□□□□ -0.12
CDT1-201ENST00000301019 NDST1P52848 882 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 UFM1P61960 85 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 ARMC4Q5T2S8 1044 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 CYHR1Q6ZMK1 362 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 ILDR2Q71H61 639 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 CTU1Q7Z7A3 348 aaKnown RBP14.29□□□□□ -0.12
CDT1-201ENST00000301019 TMEM179BQ7Z7N9 219 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 GALNT10Q86SR1 603 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 AQP12AQ8IXF9 295 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 SVOPQ8N4V2 548 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 IPMKQ8NFU5 416 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 MSANTD3Q96H12 275 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 ST6GAL2Q96JF0 529 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms