RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 OLAHQ9NV23 265 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 ABCD2Q9UBJ2 740 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 ARPC2O15144 300 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 COCHO43405 550 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 OR4F21O95013 312 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 PRAMEF12O95522 483 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 CLIC3O95833 236 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 RPS17P08708 135 aaKnown RBP12.78□□□□□ -0.36
HIF3A-204ENST00000300862 IDO1P14902 403 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 HOXB8P17481 243 aaPredicted RBP12.78□□□□□ -0.36
HIF3A-204ENST00000300862 CST5P28325 142 aaPredicted RBP12.78□□□□□ -0.36
HIF3A-204ENST00000300862 TPP2P29144 1249 aaPredicted RBP12.78□□□□□ -0.36
HIF3A-204ENST00000300862 SLC11A2P49281 568 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 TXNL4AP83876 142 aaKnown RBP12.78□□□□□ -0.36
HIF3A-204ENST00000300862 PLIN5Q00G26 463 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 AAK1Q2M2I8 961 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 TIGD2Q4W5G0 525 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 ALG1LQ6GMV1 187 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 TAS2R42Q7RTR8 314 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 EPHX4Q8IUS5 362 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 MINDY1Q8N5J2 469 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 SNRNP27Q8WVK2 155 aaKnown RBP12.78□□□□□ -0.36
HIF3A-204ENST00000300862 SPATA17Q96L03 361 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 ZNF599Q96NL3 588 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 CASD1Q96PB1 797 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 CCM2LQ9NUG4 571 aaPredicted RBP12.78□□□□□ -0.36
HIF3A-204ENST00000300862 TMEM161AQ9NX61 479 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 CD274Q9NZQ7 290 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 RSL24D1Q9UHA3 163 aaKnown RBP12.78□□□□□ -0.36
HIF3A-204ENST00000300862 PCTPQ9UKL6 214 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 PCDHB7Q9Y5E2 793 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 OAS3Q9Y6K5 1087 aaKnown RBP12.78□□□□□ -0.36
HIF3A-204ENST00000300862 PDE4DIPQ5VU43 2346 aa12.78□□□□□ -0.36
HIF3A-204ENST00000300862 KDELR3O43731 214 aa12.77□□□□□ -0.36
HIF3A-204ENST00000300862 PKMP14618 531 aaKnown RBP12.77□□□□□ -0.36
HIF3A-204ENST00000300862 ZNF23P17027 643 aa12.77□□□□□ -0.36
HIF3A-204ENST00000300862 CR2P20023 1033 aa12.77□□□□□ -0.36
HIF3A-204ENST00000300862 LPOP22079 712 aaPredicted RBP12.77□□□□□ -0.36
HIF3A-204ENST00000300862 CORO1AP31146 461 aaKnown RBP12.77□□□□□ -0.36
HIF3A-204ENST00000300862 NHSL2Q5HYW2 709 aa12.77□□□□□ -0.36
HIF3A-204ENST00000300862 RNF219Q5W0B1 726 aaPredicted RBP12.77□□□□□ -0.36
HIF3A-204ENST00000300862 CMTR2Q8IYT2 770 aaKnown RBP12.77□□□□□ -0.36
HIF3A-204ENST00000300862 TRIML2Q8N7C3 387 aa12.77□□□□□ -0.36
HIF3A-204ENST00000300862 DUS3LQ96G46 650 aaKnown RBP12.77□□□□□ -0.36
HIF3A-204ENST00000300862 MUC3BQ9H195 1237 aa12.77□□□□□ -0.36
HIF3A-204ENST00000300862 SMPD4Q9NXE4 827 aa12.77□□□□□ -0.36
HIF3A-204ENST00000300862 TRMT6Q9UJA5 497 aaKnown RBP12.77□□□□□ -0.36
HIF3A-204ENST00000300862 ZFC3H1O60293 1989 aaKnown RBP12.77□□□□□ -0.36
HIF3A-204ENST00000300862 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.77□□□□□ -0.37
HIF3A-204ENST00000300862 NBNO60934 754 aa12.77□□□□□ -0.37
HIF3A-204ENST00000300862 VPS26AO75436 327 aa12.77□□□□□ -0.37
HIF3A-204ENST00000300862 SEC24DO94855 1032 aaPredicted RBP12.77□□□□□ -0.37
HIF3A-204ENST00000300862 H6PDO95479 791 aa12.77□□□□□ -0.37
HIF3A-204ENST00000300862 BMP2P12643 396 aa12.77□□□□□ -0.37
HIF3A-204ENST00000300862 ITGB6P18564 788 aa12.77□□□□□ -0.37
HIF3A-204ENST00000300862 IL12AP29459 219 aa12.77□□□□□ -0.37
HIF3A-204ENST00000300862 GSK3BP49841 420 aa12.77□□□□□ -0.37
HIF3A-204ENST00000300862 CDH4P55283 916 aa12.77□□□□□ -0.37
HIF3A-204ENST00000300862 KCNK10P57789 538 aa12.77□□□□□ -0.37
HIF3A-204ENST00000300862 ATP6V0D1P61421 351 aa12.77□□□□□ -0.37
HIF3A-204ENST00000300862 TWF1Q12792 350 aa12.77□□□□□ -0.37
HIF3A-204ENST00000300862 TRAF2Q12933 501 aa12.77□□□□□ -0.37
HIF3A-204ENST00000300862 ZNF177Q13360 481 aaPredicted RBP12.77□□□□□ -0.37
HIF3A-204ENST00000300862 BTG3Q14201 252 aaPredicted RBP12.77□□□□□ -0.37
HIF3A-204ENST00000300862 CYP51A1Q16850 503 aa12.77□□□□□ -0.37
HIF3A-204ENST00000300862 GPSM1Q86YR5 675 aa12.77□□□□□ -0.37
HIF3A-204ENST00000300862 ANKFN1Q8N957 763 aa12.77□□□□□ -0.37
HIF3A-204ENST00000300862 FNDC8Q8TC99 324 aa12.77□□□□□ -0.37
HIF3A-204ENST00000300862 CD200R1Q8TD46 325 aa12.77□□□□□ -0.37
HIF3A-204ENST00000300862 TMEM125Q96AQ2 219 aa12.77□□□□□ -0.37
HIF3A-204ENST00000300862 TCF12Q99081 682 aa12.77□□□□□ -0.37
HIF3A-204ENST00000300862 INTS7Q9NVH2 962 aaKnown RBP12.77□□□□□ -0.37
HIF3A-204ENST00000300862 ARMC1Q9NVT9 282 aa12.77□□□□□ -0.37
HIF3A-204ENST00000300862 GID8Q9NWU2 228 aa12.77□□□□□ -0.37
HIF3A-204ENST00000300862 PCDHA9Q9Y5H5 950 aa12.77□□□□□ -0.37
HIF3A-204ENST00000300862 FRMPD3Q5JV73 1810 aa12.77□□□□□ -0.37
HIF3A-204ENST00000300862 SYCE1LA8MT33 242 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 ANKRD66B4E2M5 251 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 DLGAP1O14490 977 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 STX7O15400 261 aaKnown RBP12.76□□□□□ -0.37
HIF3A-204ENST00000300862 SNX2O60749 519 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 MATN4O95460 622 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 ESRRBO95718 433 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 CTPS1P17812 591 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 ZFP36L2P47974 494 aaKnown RBP12.76□□□□□ -0.37
HIF3A-204ENST00000300862 ALDH3B2P48448 385 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 SREBF2Q12772 1141 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 TCTN1Q2MV58 587 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 PPP4R4Q6NUP7 873 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 KIAA2013Q8IYS2 634 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 ADGRG5Q8IZF4 528 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 OR6K2Q8NGY2 324 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 RNF38Q9H0F5 515 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 AIG1Q9NVV5 245 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 SMOXQ9NWM0 555 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 THEGQ9P2T0 379 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 OAZ3Q9UMX2 235 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 RNF103-CHMP3A0A140T963 221 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 A0A1W2PP18 115 aa12.76□□□□□ -0.37
HIF3A-204ENST00000300862 E5RI56 91 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms