RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 SESN2P58004 480 aaPredicted RBP20.91■□□□□ 0.94
SMCO4-201ENST00000298966 RPS21P63220 83 aaKnown RBP20.91■□□□□ 0.94
SMCO4-201ENST00000298966 CDK18Q07002 472 aa20.91■□□□□ 0.94
SMCO4-201ENST00000298966 SPARCL1Q14515 664 aa20.91■□□□□ 0.94
SMCO4-201ENST00000298966 PCID2Q5JVF3 399 aa20.91■□□□□ 0.94
SMCO4-201ENST00000298966 SPANXN3Q5MJ09 141 aa20.91■□□□□ 0.94
SMCO4-201ENST00000298966 PERM1Q5SV97 790 aa20.91■□□□□ 0.94
SMCO4-201ENST00000298966 KIAA1161Q6NSJ0 714 aa20.91■□□□□ 0.94
SMCO4-201ENST00000298966 LEKR1Q6ZMV7 388 aa20.91■□□□□ 0.94
SMCO4-201ENST00000298966 NAT6Q93015 286 aa20.91■□□□□ 0.94
SMCO4-201ENST00000298966 PGM2Q96G03 612 aa20.91■□□□□ 0.94
SMCO4-201ENST00000298966 ATP6V1G3Q96LB4 118 aa20.91■□□□□ 0.94
SMCO4-201ENST00000298966 ACSS3Q9H6R3 686 aa20.91■□□□□ 0.94
SMCO4-201ENST00000298966 SYNDIG1Q9H7V2 258 aa20.91■□□□□ 0.94
SMCO4-201ENST00000298966 UBP1Q9NZI7 540 aa20.91■□□□□ 0.94
SMCO4-201ENST00000298966 SLC24A2Q9UI40 661 aa20.91■□□□□ 0.94
SMCO4-201ENST00000298966 A0A1W2PQ67 120 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 RRP9O43818 475 aaKnown RBP20.9■□□□□ 0.94
SMCO4-201ENST00000298966 SOCS5O75159 536 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 USP1O94782 785 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 NDST3O95803 873 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 RECQLP46063 649 aaPredicted RBP20.9■□□□□ 0.94
SMCO4-201ENST00000298966 SCNN1BP51168 640 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 NEK3P51956 506 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 RPL26P61254 145 aaKnown RBP20.9■□□□□ 0.94
SMCO4-201ENST00000298966 PDE1CQ14123 709 aaPredicted RBP20.9■□□□□ 0.94
SMCO4-201ENST00000298966 SPIDRQ14159 915 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 SLC1A5Q15758 541 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 LINC00303Q3SY05 128 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 ARSIQ5FYB1 569 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 COLEC12Q5KU26 742 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 FAM182AQ5T1J6 154 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 CASC4Q6P4E1 433 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 LINGO4Q6UY18 593 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 NLRP9Q7RTR0 991 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 SRLQ86TD4 932 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 CHST14Q8NCH0 376 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 PPHLN1Q8NEY8 458 aaKnown RBP20.9■□□□□ 0.94
SMCO4-201ENST00000298966 GRIN3AQ8TCU5 1115 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 BTN2A2Q8WVV5 523 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 SPOCK2Q92563 424 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 PEX13Q92968 403 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 ARL8AQ96BM9 186 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 TUBGCP5Q96RT8 1024 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 SRPK1Q96SB4 655 aaKnown RBP20.9■□□□□ 0.94
SMCO4-201ENST00000298966 CYTH2Q99418 400 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 ADGRE3Q9BY15 652 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 STARD5Q9NSY2 213 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 IL36AQ9UHA7 158 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 SOX13Q9UN79 622 aa20.9■□□□□ 0.94
SMCO4-201ENST00000298966 RPL26L1Q9UNX3 145 aaKnown RBP20.9■□□□□ 0.94
SMCO4-201ENST00000298966 FPGTO14772 594 aa20.89■□□□□ 0.93
SMCO4-201ENST00000298966 RASGRF2O14827 1237 aa20.89■□□□□ 0.93
SMCO4-201ENST00000298966 CDH16O75309 829 aa20.89■□□□□ 0.93
SMCO4-201ENST00000298966 BANF1O75531 89 aa20.89■□□□□ 0.93
SMCO4-201ENST00000298966 ADRA1DP25100 572 aa20.89■□□□□ 0.93
SMCO4-201ENST00000298966 ATP5DP30049 168 aa20.89■□□□□ 0.93
SMCO4-201ENST00000298966 GPX6P59796 221 aa20.89■□□□□ 0.93
SMCO4-201ENST00000298966 RAD51Q06609 339 aa20.89■□□□□ 0.93
SMCO4-201ENST00000298966 NAB1Q13506 487 aa20.89■□□□□ 0.93
SMCO4-201ENST00000298966 TTMPQ5BVD1 217 aa20.89■□□□□ 0.93
SMCO4-201ENST00000298966 DENND5AQ6IQ26 1287 aa20.89■□□□□ 0.93
SMCO4-201ENST00000298966 TMEM135Q86UB9 458 aa20.89■□□□□ 0.93
SMCO4-201ENST00000298966 TDRPQ86YL5 185 aa20.89■□□□□ 0.93
SMCO4-201ENST00000298966 OR2AP1Q8NGE2 309 aa20.89■□□□□ 0.93
SMCO4-201ENST00000298966 UHMK1Q8TAS1 419 aaKnown RBP20.89■□□□□ 0.93
SMCO4-201ENST00000298966 SGF29Q96ES7 293 aa20.89■□□□□ 0.93
SMCO4-201ENST00000298966 KIFC1Q9BW19 673 aa20.89■□□□□ 0.93
SMCO4-201ENST00000298966 BOCQ9BWV1 1114 aa20.89■□□□□ 0.93
SMCO4-201ENST00000298966 TDRD1Q9BXT4 1180 aaKnown RBP20.89■□□□□ 0.93
SMCO4-201ENST00000298966 NOD2Q9HC29 1040 aa20.89■□□□□ 0.93
SMCO4-201ENST00000298966 SYBUQ9NX95 663 aa20.89■□□□□ 0.93
SMCO4-201ENST00000298966 SPASTQ9UBP0 616 aa20.89■□□□□ 0.93
SMCO4-201ENST00000298966 KLF15Q9UIH9 416 aa20.89■□□□□ 0.93
SMCO4-201ENST00000298966 BOD1L1Q8NFC6 3051 aa20.88■□□□□ 0.93
SMCO4-201ENST00000298966 EXOC1LA0A1B0GW35 172 aa20.88■□□□□ 0.93
SMCO4-201ENST00000298966 HEATR9A2RTY3 570 aa20.88■□□□□ 0.93
SMCO4-201ENST00000298966 K7ERQ8 282 aa20.88■□□□□ 0.93
SMCO4-201ENST00000298966 RAD51BO15315 384 aa20.88■□□□□ 0.93
SMCO4-201ENST00000298966 EFSO43281 561 aa20.88■□□□□ 0.93
SMCO4-201ENST00000298966 AGTP01019 485 aa20.88■□□□□ 0.93
SMCO4-201ENST00000298966 ITGB2P05107 769 aa20.88■□□□□ 0.93
SMCO4-201ENST00000298966 SSTR1P30872 391 aa20.88■□□□□ 0.93
SMCO4-201ENST00000298966 NFKB2Q00653 900 aa20.88■□□□□ 0.93
SMCO4-201ENST00000298966 FGL2Q14314 439 aa20.88■□□□□ 0.93
SMCO4-201ENST00000298966 PCSK7Q16549 785 aa20.88■□□□□ 0.93
SMCO4-201ENST00000298966 C22orf39Q6P5X5 142 aa20.88■□□□□ 0.93
SMCO4-201ENST00000298966 UNC5AQ6ZN44 842 aa20.88■□□□□ 0.93
SMCO4-201ENST00000298966 LURAP1LQ8IV03 231 aa20.88■□□□□ 0.93
SMCO4-201ENST00000298966 IGDCC3Q8IVU1 814 aa20.88■□□□□ 0.93
SMCO4-201ENST00000298966 SLC35F3Q8IY50 421 aa20.88■□□□□ 0.93
SMCO4-201ENST00000298966 AGGF1Q8N302 714 aaeCLIP20.88■□□□□ 0.93
SMCO4-201ENST00000298966 CDKL2Q92772 493 aa20.88■□□□□ 0.93
SMCO4-201ENST00000298966 LIN37Q96GY3 246 aaPredicted RBP20.88■□□□□ 0.93
SMCO4-201ENST00000298966 CCDC3Q9BQI4 270 aa20.88■□□□□ 0.93
SMCO4-201ENST00000298966 RIMKLBQ9ULI2 386 aa20.88■□□□□ 0.93
SMCO4-201ENST00000298966 FCF1Q9Y324 198 aaKnown RBP20.88■□□□□ 0.93
SMCO4-201ENST00000298966 PCDHGA7Q9Y5G6 932 aa20.88■□□□□ 0.93
SMCO4-201ENST00000298966 SMAD6O43541 496 aaKnown RBP20.87■□□□□ 0.93
SMCO4-201ENST00000298966 LEFTY1O75610 366 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms