RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 DAOAP59103 153 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 MRNIPQ6NTE8 343 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 IL27RAQ6UWB1 636 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 LGI2Q8N0V4 545 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 METTL6Q8TCB7 284 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 HDAC2Q92769 488 aaKnown RBP11.31□□□□□ -0.6
TRUB1-201ENST00000298746 CEP19Q96LK0 163 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 FCRL5Q96RD9 977 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 SDR39U1Q9NRG7 319 aaPredicted RBP11.31□□□□□ -0.6
TRUB1-201ENST00000298746 MARCH4Q9P2E8 410 aaPredicted RBP11.31□□□□□ -0.6
TRUB1-201ENST00000298746 ABCD2Q9UBJ2 740 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 LOC100130705A0A1B0GUX0 176 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 CCDC162PA2VCL2 907 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 I6L893 689 aaPredicted RBP11.31□□□□□ -0.6
TRUB1-201ENST00000298746 BCKDKO14874 412 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 MSI1O43347 362 aaKnown RBP11.31□□□□□ -0.6
TRUB1-201ENST00000298746 IDH3BO43837 385 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 BMP4P12644 408 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 PNPLA4P41247 253 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 EEFSECP57772 596 aaKnown RBP11.31□□□□□ -0.6
TRUB1-201ENST00000298746 LCP2Q13094 533 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 NPTX1Q15818 432 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 ATAD3BQ5T9A4 648 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 OTUD1Q5VV17 481 aaPredicted RBP11.31□□□□□ -0.6
TRUB1-201ENST00000298746 XAF1Q6GPH4 301 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 DTWD1Q8N5C7 304 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 FRS2Q8WU20 508 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 NUDT8Q8WV74 236 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 STON2Q8WXE9 905 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 SLC47A1Q96FL8 570 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 SLC9A7Q96T83 725 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 TDRD1Q9BXT4 1180 aaKnown RBP11.31□□□□□ -0.6
TRUB1-201ENST00000298746 RNF39Q9H2S5 420 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 ENPP5Q9UJA9 477 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 TPRKBQ9Y3C4 175 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 ANGPTL3Q9Y5C1 460 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 PCDHA9Q9Y5H5 950 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 MYBPHLA2RUH7 354 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 TNPO2O14787 897 aaKnown RBP11.31□□□□□ -0.6
TRUB1-201ENST00000298746 NDUFS3O75489 264 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 ARSDP51689 593 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 TSNQ15631 228 aaKnown RBP11.31□□□□□ -0.6
TRUB1-201ENST00000298746 LBX2Q6XYB7 198 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 TAC4Q86UU9 113 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 HID1Q8IV36 788 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 CHDHQ8NE62 594 aaPredicted RBP11.31□□□□□ -0.6
TRUB1-201ENST00000298746 PROX1Q92786 737 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 MUC13Q9H3R2 512 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 WDR6Q9NNW5 1121 aaKnown RBP11.31□□□□□ -0.6
TRUB1-201ENST00000298746 ERVK-18Q9QC07 812 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 GALPQ9UBC7 116 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 ZMYM5Q9UJ78 669 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 INVSQ9Y283 1065 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 ARID2Q68CP9 1835 aa11.31□□□□□ -0.6
TRUB1-201ENST00000298746 SLC1A7O00341 560 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 SLC22A1O15245 554 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 ALDH2P05091 517 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 ALPLP05186 524 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 MYL3P08590 195 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 SLC2A4P14672 509 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 DPEP1P16444 411 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 DNAJB1P25685 340 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 PRDX3P30048 256 aaKnown RBP11.3□□□□□ -0.6
TRUB1-201ENST00000298746 PIGAP37287 484 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 LEPRP48357 1165 aaKnown RBP11.3□□□□□ -0.6
TRUB1-201ENST00000298746 LILRA4P59901 499 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 EPS8Q12929 822 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 TOP3AQ13472 1001 aaPredicted RBP11.3□□□□□ -0.6
TRUB1-201ENST00000298746 INTS6LQ5JSJ4 861 aaKnown RBP11.3□□□□□ -0.6
TRUB1-201ENST00000298746 ENPP6Q6UWR7 440 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 DET1Q7L5Y6 550 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 GPRIN1Q7Z2K8 1008 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 RIOX2Q8IUF8 465 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 CILP2Q8IUL8 1156 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 ADHFE1Q8IWW8 467 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 MTMR14Q8NCE2 650 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 STAG3L4Q8TBR4 150 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 NTAN1Q96AB6 310 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 GAD1Q99259 594 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 RBM4BQ9BQ04 359 aaKnown RBP11.3□□□□□ -0.6
TRUB1-201ENST00000298746 RBM4Q9BWF3 364 aaKnown RBP11.3□□□□□ -0.6
TRUB1-201ENST00000298746 CPA4Q9UI42 421 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 PDZK1P1A8MUH7 402 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 PRKD3O94806 890 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 OR4F21O95013 312 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 PGLSO95336 258 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 STAU1O95793 577 aaKnown RBP11.3□□□□□ -0.6
TRUB1-201ENST00000298746 HSMCR30P0CW71 290 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 CCNCP24863 283 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 GTF2E2P29084 291 aaKnown RBP11.3□□□□□ -0.6
TRUB1-201ENST00000298746 PIK3CGP48736 1102 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 AGTR2P50052 363 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 DSC2Q02487 901 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 GRIK4Q16099 956 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 MARC1Q5VT66 337 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 RPL3LQ92901 407 aaKnown RBP11.3□□□□□ -0.6
TRUB1-201ENST00000298746 RMDN1Q96DB5 314 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 SLC10A4Q96EP9 437 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 CEP44Q9C0F1 390 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 USE1Q9NZ43 259 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms