RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 PEX6Q13608 980 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 GUSBP11Q6P575 273 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 LRIG3Q6UXM1 1119 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 C4orf22Q6V702 233 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 TMPRSS7Q7RTY8 843 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 NRROSQ86YC3 692 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 PHYKPLQ8IUZ5 450 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 IFT20Q8IY31 132 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 ARL10Q8N8L6 244 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 OR52K1Q8NGK4 314 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 ZNF398Q8TD17 642 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 TTC25Q96NG3 672 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 RMI1Q9H9A7 625 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 SPATS2LQ9NUQ6 558 aaKnown RBP11.95□□□□□ -0.5
HMGB2-201ENST00000296503 WASF3Q9UPY6 502 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 U3KQA8 63 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 LRP4O75096 1905 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 EME2A4GXA9 379 aaPredicted RBP11.95□□□□□ -0.5
HMGB2-201ENST00000296503 H0YHG0 523 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 PGRMC1O00264 195 aaKnown RBP11.95□□□□□ -0.5
HMGB2-201ENST00000296503 GRID2O43424 1007 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 NUAK1O60285 661 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 DNAJC6O75061 913 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 MTX2O75431 263 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 CDK14O94921 469 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 APRTP07741 180 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 ZNF8P17098 575 aaPredicted RBP11.95□□□□□ -0.5
HMGB2-201ENST00000296503 ACTR1BP42025 376 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 CLDN6P56747 220 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 ACTR1AP61163 376 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 MSLNQ13421 630 aaPredicted RBP11.95□□□□□ -0.5
HMGB2-201ENST00000296503 ITGA9Q13797 1035 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 SEPT6Q14141 434 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 POU6F1Q14863 301 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 LACTB2Q53H82 288 aaPredicted RBP11.95□□□□□ -0.5
HMGB2-201ENST00000296503 OGFOD3Q6PK18 319 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 ADGRG6Q86SQ4 1221 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 OR13C4Q8NGS5 318 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 MIEF2Q96C03 454 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 VPS35Q96QK1 796 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 SMARCAL1Q9NZC9 954 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 TAAR2Q9P1P5 351 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 APPL1Q9UKG1 709 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 TTC7AQ9ULT0 858 aaPredicted RBP11.95□□□□□ -0.5
HMGB2-201ENST00000296503 NEUROG3Q9Y4Z2 214 aa11.95□□□□□ -0.5
HMGB2-201ENST00000296503 FAM149AA5PLN7 773 aa11.94□□□□□ -0.5
HMGB2-201ENST00000296503 ZNF185O15231 689 aa11.94□□□□□ -0.5
HMGB2-201ENST00000296503 VEGFDO43915 354 aa11.94□□□□□ -0.5
HMGB2-201ENST00000296503 GP1BAP07359 652 aa11.94□□□□□ -0.5
HMGB2-201ENST00000296503 MDH1P40925 334 aaKnown RBP11.94□□□□□ -0.5
HMGB2-201ENST00000296503 HADHAP40939 763 aa11.94□□□□□ -0.5
HMGB2-201ENST00000296503 PAFAH1B1P43034 410 aa11.94□□□□□ -0.5
HMGB2-201ENST00000296503 BASP1P80723 227 aaKnown RBP11.94□□□□□ -0.5
HMGB2-201ENST00000296503 CDH17Q12864 832 aa11.94□□□□□ -0.5
HMGB2-201ENST00000296503 TMEM115Q12893 351 aaPredicted RBP11.94□□□□□ -0.5
HMGB2-201ENST00000296503 BIRC2Q13490 618 aa11.94□□□□□ -0.5
HMGB2-201ENST00000296503 SEMA5AQ13591 1074 aa11.94□□□□□ -0.5
HMGB2-201ENST00000296503 GTF2H3Q13889 308 aa11.94□□□□□ -0.5
HMGB2-201ENST00000296503 TRIP13Q15645 432 aaPredicted RBP11.94□□□□□ -0.5
HMGB2-201ENST00000296503 SMAD1Q15797 465 aaKnown RBP11.94□□□□□ -0.5
HMGB2-201ENST00000296503 TMPRSS12Q86WS5 348 aa11.94□□□□□ -0.5
HMGB2-201ENST00000296503 MARCH9Q86YJ5 346 aa11.94□□□□□ -0.5
HMGB2-201ENST00000296503 KYQ8NBH2 561 aa11.94□□□□□ -0.5
HMGB2-201ENST00000296503 MAPK15Q8TD08 544 aa11.94□□□□□ -0.5
HMGB2-201ENST00000296503 DTX3LQ8TDB6 740 aa11.94□□□□□ -0.5
HMGB2-201ENST00000296503 ZNF473Q8WTR7 871 aaKnown RBP11.94□□□□□ -0.5
HMGB2-201ENST00000296503 ZDHHC1Q8WTX9 485 aa11.94□□□□□ -0.5
HMGB2-201ENST00000296503 NAT6Q93015 286 aa11.94□□□□□ -0.5
HMGB2-201ENST00000296503 ASB8Q9H765 288 aa11.94□□□□□ -0.5
HMGB2-201ENST00000296503 FKBPLQ9UIM3 349 aa11.94□□□□□ -0.5
HMGB2-201ENST00000296503 TMPRSS11EQ9UL52 423 aa11.94□□□□□ -0.5
HMGB2-201ENST00000296503 MSRB2Q9Y3D2 182 aa11.94□□□□□ -0.5
HMGB2-201ENST00000296503 KNTC1P50748 2209 aa11.94□□□□□ -0.5
HMGB2-201ENST00000296503 LDB2O43679 373 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 ACP5P13686 325 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 COILP38432 576 aaPredicted RBP11.93□□□□□ -0.5
HMGB2-201ENST00000296503 LRP8Q14114 963 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 PERM1Q5SV97 790 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 LDLRAP1Q5SW96 308 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 HES3Q5TGS1 186 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 SFTPA2Q8IWL1 248 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 GPR156Q8NFN8 814 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 OR6C4Q8NGE1 309 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 ACTRT1Q8TDG2 376 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 LRRC1Q9BTT6 524 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 DMGDHQ9UI17 866 aaKnown RBP11.93□□□□□ -0.5
HMGB2-201ENST00000296503 PCYT1BQ9Y5K3 369 aaPredicted RBP11.93□□□□□ -0.5
HMGB2-201ENST00000296503 ST14Q9Y5Y6 855 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 ARHGEF17Q96PE2 2063 aaPredicted RBP11.93□□□□□ -0.5
HMGB2-201ENST00000296503 ASXL3Q9C0F0 2248 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 TRBV23OR9-2A0A075B6M9 112 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 GOLGA6L10A0A0M3HER8 536 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 CCDC189A1A4V9 331 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 FAM221BA6H8Z2 402 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 GPR89AB7ZAQ6 455 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 CES2O00748 559 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 NOBOXO60393 691 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 SRP72O76094 671 aaKnown RBP11.93□□□□□ -0.5
HMGB2-201ENST00000296503 SUN1O94901 812 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 PRAMEF1O95521 474 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms