RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 MTHFRP42898 656 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 PSMD8P48556 350 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 CLCN5P51795 746 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 BNIP2Q12982 314 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 CEACAM7Q14002 265 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 TIGD5Q53EQ6 642 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 CHST9Q7L1S5 443 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 HIPK1Q86Z02 1210 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 PQLC3Q8N755 202 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 TWIST2Q8WVJ9 160 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 APOL4Q9BPW4 351 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 MINDY3Q9H8M7 445 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 OXSMQ9NWU1 459 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 AHSPQ9NZD4 102 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 DUSP12Q9UNI6 340 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 SLC45A1Q9Y2W3 748 aa13.34□□□□□ -0.27
HPS3-201ENST00000296051 GSAPA4D1B5 854 aa13.33□□□□□ -0.27
HPS3-201ENST00000296051 SLC22A3O75751 556 aa13.33□□□□□ -0.27
HPS3-201ENST00000296051 LRIG2O94898 1065 aa13.33□□□□□ -0.27
HPS3-201ENST00000296051 S100A3P33764 101 aa13.33□□□□□ -0.27
HPS3-201ENST00000296051 DGKEP52429 567 aa13.33□□□□□ -0.27
HPS3-201ENST00000296051 HECTD2Q5U5R9 776 aa13.33□□□□□ -0.27
HPS3-201ENST00000296051 SYPL2Q5VXT5 272 aa13.33□□□□□ -0.27
HPS3-201ENST00000296051 STRADAQ7RTN6 431 aa13.33□□□□□ -0.27
HPS3-201ENST00000296051 KRT78Q8N1N4 520 aa13.33□□□□□ -0.27
HPS3-201ENST00000296051 CENPNQ96H22 339 aaPredicted RBP13.33□□□□□ -0.27
HPS3-201ENST00000296051 BTN2A3PQ96KV6 586 aa13.33□□□□□ -0.27
HPS3-201ENST00000296051 CATSPERZQ9NTU4 200 aa13.33□□□□□ -0.27
HPS3-201ENST00000296051 CDV3Q9UKY7 258 aaKnown RBP13.33□□□□□ -0.27
HPS3-201ENST00000296051 G3V2T6 193 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 CLDN11O75508 207 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 SERPINI2O75830 405 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 PURAQ00577 322 aaKnown RBP13.33□□□□□ -0.28
HPS3-201ENST00000296051 CPSF6Q16630 551 aaKnown RBP eCLIP13.33□□□□□ -0.28
HPS3-201ENST00000296051 TYW3Q6IPR3 259 aaKnown RBP13.33□□□□□ -0.28
HPS3-201ENST00000296051 SLC26A9Q7LBE3 791 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 TAS1R3Q7RTX0 852 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 TBC1D21Q8IYX1 336 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 CPSF7Q8N684 471 aaKnown RBP13.33□□□□□ -0.28
HPS3-201ENST00000296051 TMEM245Q9H330 911 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 RMND5AQ9H871 391 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 GLOD4Q9HC38 313 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 ADGRE2Q9UHX3 823 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 CYTH4Q9UIA0 394 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 LRRC37A3O60309 1634 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 OR51F1A6NGY5 319 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 SOCS7O14512 581 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 PIP5K1BO14986 540 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 AQP1P29972 269 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 CCDC80Q76M96 950 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 PHF21AQ96BD5 680 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 FEM1CQ96JP0 617 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 TEKT5Q96M29 485 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 ACBD6Q9BR61 282 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 IMP3Q9NV31 184 aaKnown RBP13.33□□□□□ -0.28
HPS3-201ENST00000296051 EVLQ9UI08 416 aaPredicted RBP13.33□□□□□ -0.28
HPS3-201ENST00000296051 SATB2Q9UPW6 733 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 UBXN8O00124 270 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 PPEF2O14830 753 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 PRDX6P30041 224 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 GDI1P31150 447 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 IL2P60568 153 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 GK3PQ14409 553 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 ZNF846Q147U1 533 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 TCEAL1Q15170 157 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 EPGNQ6UW88 154 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 PNPLA1Q8N8W4 532 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 SETD9Q8NE22 299 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 ASF1AQ9Y294 204 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 ZNF510Q9Y2H8 683 aa13.33□□□□□ -0.28
HPS3-201ENST00000296051 TNFRSF21O75509 655 aa13.32□□□□□ -0.28
HPS3-201ENST00000296051 RSL1D1O76021 490 aaKnown RBP13.32□□□□□ -0.28
HPS3-201ENST00000296051 IFNA16P05015 189 aa13.32□□□□□ -0.28
HPS3-201ENST00000296051 GUCA1AP43080 201 aaPredicted RBP13.32□□□□□ -0.28
HPS3-201ENST00000296051 MTPNP58546 118 aa13.32□□□□□ -0.28
HPS3-201ENST00000296051 INAQ16352 499 aa13.32□□□□□ -0.28
HPS3-201ENST00000296051 GATAD2AQ86YP4 633 aa13.32□□□□□ -0.28
HPS3-201ENST00000296051 OR2T12Q8NG77 320 aa13.32□□□□□ -0.28
HPS3-201ENST00000296051 MARCH7Q9H992 704 aa13.32□□□□□ -0.28
HPS3-201ENST00000296051 USP29Q9HBJ7 922 aa13.32□□□□□ -0.28
HPS3-201ENST00000296051 HEMK1Q9Y5R4 338 aaPredicted RBP13.32□□□□□ -0.28
HPS3-201ENST00000296051 GRM6O15303 877 aa13.32□□□□□ -0.28
HPS3-201ENST00000296051 ANXA6P08133 673 aa13.32□□□□□ -0.28
HPS3-201ENST00000296051 SLC35G4P0C7Q5 338 aa13.32□□□□□ -0.28
HPS3-201ENST00000296051 IRF8Q02556 426 aa13.32□□□□□ -0.28
HPS3-201ENST00000296051 SULT2A1Q06520 285 aa13.32□□□□□ -0.28
HPS3-201ENST00000296051 GRSF1Q12849 480 aaKnown RBP eCLIP13.32□□□□□ -0.28
HPS3-201ENST00000296051 PPP1R3AQ16821 1122 aa13.32□□□□□ -0.28
HPS3-201ENST00000296051 SVOPQ8N4V2 548 aa13.32□□□□□ -0.28
HPS3-201ENST00000296051 MAPK15Q8TD08 544 aa13.32□□□□□ -0.28
HPS3-201ENST00000296051 KRT87PA6NCN2 255 aa13.32□□□□□ -0.28
HPS3-201ENST00000296051 TPD52L2O43399 206 aaKnown RBP13.32□□□□□ -0.28
HPS3-201ENST00000296051 CFIP05156 583 aa13.32□□□□□ -0.28
HPS3-201ENST00000296051 SLC7A1P30825 629 aa13.32□□□□□ -0.28
HPS3-201ENST00000296051 SKP1P63208 163 aa13.32□□□□□ -0.28
HPS3-201ENST00000296051 CYP2A13Q16696 494 aa13.32□□□□□ -0.28
HPS3-201ENST00000296051 THAP5Q7Z6K1 395 aa13.32□□□□□ -0.28
HPS3-201ENST00000296051 DNAJB7Q7Z6W7 309 aaPredicted RBP13.32□□□□□ -0.28
HPS3-201ENST00000296051 PHC3Q8NDX5 983 aa13.32□□□□□ -0.28
HPS3-201ENST00000296051 OR10Q1Q8NGQ4 319 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms