RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 PTRHD1Q6GMV3 140 aaKnown RBP19.77■□□□□ 0.76
CXCL16-201ENST00000293778 SERPINA9Q86WD7 417 aa19.77■□□□□ 0.76
CXCL16-201ENST00000293778 ACDQ96AP0 544 aa19.77■□□□□ 0.76
CXCL16-201ENST00000293778 PDLIM5Q96HC4 596 aaKnown RBP19.77■□□□□ 0.76
CXCL16-201ENST00000293778 HOPXQ9BPY8 73 aaPredicted RBP19.77■□□□□ 0.76
CXCL16-201ENST00000293778 CLPBQ9H078 707 aa19.77■□□□□ 0.76
CXCL16-201ENST00000293778 ZFYVE1Q9HBF4 777 aa19.77■□□□□ 0.76
CXCL16-201ENST00000293778 PFDN4Q9NQP4 134 aa19.77■□□□□ 0.76
CXCL16-201ENST00000293778 GPR45Q9Y5Y3 372 aa19.77■□□□□ 0.76
CXCL16-201ENST00000293778 DNAJA2O60884 412 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 CYBBP04839 570 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 CKMP06732 381 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 ZNF7P17097 686 aaPredicted RBP19.76■□□□□ 0.75
CXCL16-201ENST00000293778 PRMT9Q6P2P2 845 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 CYP2R1Q6VVX0 501 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 FRA10AC1Q70Z53 315 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 MRPS31Q92665 395 aaKnown RBP19.76■□□□□ 0.75
CXCL16-201ENST00000293778 LRCH3Q96II8 777 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 Q9H521 79 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 PLK2Q9NYY3 685 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 CFAP97Q9P2B7 532 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 TSR3Q9UJK0 312 aaKnown RBP19.76■□□□□ 0.75
CXCL16-201ENST00000293778 MAFFQ9ULX9 164 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 ASB3Q9Y575 518 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 OBSL1O75147 1896 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 C1orf232A0A0U1RR37 186 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 TCRBV3S1A0A5B6 114 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 STAMBPO95630 424 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 TRBC1P01850 177 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 CAPNS1P04632 268 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 HSPA8P11142 646 aaKnown RBP19.76■□□□□ 0.75
CXCL16-201ENST00000293778 PIM1P11309 404 aaPredicted RBP19.76■□□□□ 0.75
CXCL16-201ENST00000293778 PITRM1Q5JRX3 1037 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 BLOC1S3Q6QNY0 202 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 CCDC97Q96F63 343 aaPredicted RBP19.76■□□□□ 0.75
CXCL16-201ENST00000293778 ZNF382Q96SR6 550 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 ACOX2Q99424 681 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 TMEM39AQ9NV64 488 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 AIG1Q9NVV5 245 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 ATP11BQ9Y2G3 1177 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 SH3BP1Q9Y3L3 701 aa19.76■□□□□ 0.75
CXCL16-201ENST00000293778 ABHD14A-ACY1A0A1B0GW23 586 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 GAPDHSO14556 408 aaPredicted RBP19.75■□□□□ 0.75
CXCL16-201ENST00000293778 HTRA2O43464 458 aaPredicted RBP19.75■□□□□ 0.75
CXCL16-201ENST00000293778 DENRO43583 198 aaKnown RBP19.75■□□□□ 0.75
CXCL16-201ENST00000293778 OR4F21O95013 312 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 GKP32189 559 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 MAPK8P45983 427 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 APLP1P51693 650 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 TLR1Q15399 786 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 SCIMPQ6UWF3 145 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 GAREM2Q75VX8 874 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 ADAMTSL2Q86TH1 951 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 DHFR2Q86XF0 187 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 BBS7Q8IWZ6 715 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 MINDY1Q8N5J2 469 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 GRIN3AQ8TCU5 1115 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 CIPCQ9C0C6 399 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 ASB8Q9H765 288 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.75■□□□□ 0.75
CXCL16-201ENST00000293778 GID8Q9NWU2 228 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 RAB26Q9ULW5 256 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 NME4O00746 187 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 MAP3K13O43283 966 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 BMP1P13497 986 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 ITGALP20701 1170 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 RPS3P23396 243 aaKnown RBP eCLIP19.75■□□□□ 0.751e-6■■□□□ 14.1
CXCL16-201ENST00000293778 CA8P35219 290 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 CSNK1DP48730 415 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 LMAN2Q12907 356 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 COQ5Q5HYK3 327 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 HTR3DQ70Z44 454 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 SNX20Q7Z614 316 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 CMTR2Q8IYT2 770 aaKnown RBP19.75■□□□□ 0.75
CXCL16-201ENST00000293778 ST13P4Q8IZP2 240 aaPredicted RBP19.75■□□□□ 0.75
CXCL16-201ENST00000293778 RBFAQ8N0V3 343 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 CDYL2Q8N8U2 506 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 PIP4K2CQ8TBX8 421 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 PBXIP1Q96AQ6 731 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 DUS3LQ96G46 650 aaKnown RBP19.75■□□□□ 0.75
CXCL16-201ENST00000293778 GBP5Q96PP8 586 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 BOCQ9BWV1 1114 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 GMPR2Q9P2T1 348 aaKnown RBP19.75■□□□□ 0.75
CXCL16-201ENST00000293778 ABCD2Q9UBJ2 740 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 CLEC4EQ9ULY5 219 aa19.75■□□□□ 0.75
CXCL16-201ENST00000293778 SOCS5O75159 536 aa19.74■□□□□ 0.75
CXCL16-201ENST00000293778 HNF1BP35680 557 aa19.74■□□□□ 0.75
CXCL16-201ENST00000293778 MRPL19P49406 292 aaKnown RBP19.74■□□□□ 0.75
CXCL16-201ENST00000293778 MNX1P50219 401 aaPredicted RBP19.74■□□□□ 0.75
CXCL16-201ENST00000293778 CHN2P52757 468 aa19.74■□□□□ 0.75
CXCL16-201ENST00000293778 GRIK2Q13002 908 aa19.74■□□□□ 0.75
CXCL16-201ENST00000293778 NFATC2Q13469 925 aa19.74■□□□□ 0.75
CXCL16-201ENST00000293778 GRM2Q14416 872 aa19.74■□□□□ 0.75
CXCL16-201ENST00000293778 MPPE1Q53F39 396 aa19.74■□□□□ 0.75
CXCL16-201ENST00000293778 UGT2A3Q6UWM9 527 aa19.74■□□□□ 0.75
CXCL16-201ENST00000293778 TPGS1Q6ZTW0 290 aa19.74■□□□□ 0.75
CXCL16-201ENST00000293778 CPXM2Q8N436 756 aa19.74■□□□□ 0.75
CXCL16-201ENST00000293778 MARVELD2Q8N4S9 558 aa19.74■□□□□ 0.75
CXCL16-201ENST00000293778 OR52B6Q8NGF0 335 aa19.74■□□□□ 0.75
CXCL16-201ENST00000293778 OR2T11Q8NH01 316 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms