RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 GOT2P00505 430 aaKnown RBP16.66■□□□□ 0.26
CPSF4-201ENST00000292476 RBP1P09455 135 aa16.66■□□□□ 0.26
CPSF4-201ENST00000292476 PIM1P11309 404 aaPredicted RBP16.66■□□□□ 0.26
CPSF4-201ENST00000292476 ARSAP15289 507 aa16.66■□□□□ 0.26
CPSF4-201ENST00000292476 PMLP29590 882 aa16.66■□□□□ 0.26
CPSF4-201ENST00000292476 PTPN5P54829 565 aa16.66■□□□□ 0.26
CPSF4-201ENST00000292476 TAS2R39P59534 338 aa16.66■□□□□ 0.26
CPSF4-201ENST00000292476 PFKPQ01813 784 aa16.66■□□□□ 0.26
CPSF4-201ENST00000292476 OR52E8Q6IFG1 317 aa16.66■□□□□ 0.26
CPSF4-201ENST00000292476 KLC3Q6P597 504 aa16.66■□□□□ 0.26
CPSF4-201ENST00000292476 BRAT1Q6PJG6 821 aa16.66■□□□□ 0.26
CPSF4-201ENST00000292476 OR6K2Q8NGY2 324 aa16.66■□□□□ 0.26
CPSF4-201ENST00000292476 SLC26A7Q8TE54 656 aa16.66■□□□□ 0.26
CPSF4-201ENST00000292476 NXNL1Q96CM4 212 aa16.66■□□□□ 0.26
CPSF4-201ENST00000292476 ECHDC3Q96DC8 303 aa16.66■□□□□ 0.26
CPSF4-201ENST00000292476 ASIC4Q96FT7 647 aa16.66■□□□□ 0.26
CPSF4-201ENST00000292476 TRAPPC9Q96Q05 1148 aa16.66■□□□□ 0.26
CPSF4-201ENST00000292476 ZBTB26Q9HCK0 441 aa16.66■□□□□ 0.26
CPSF4-201ENST00000292476 MUTYHQ9UIF7 546 aa16.66■□□□□ 0.26
CPSF4-201ENST00000292476 CCDC162PA2VCL2 907 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 F7P08709 466 aaPredicted RBP16.65■□□□□ 0.26
CPSF4-201ENST00000292476 SAT1P21673 171 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 GLRBP48167 497 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 ARSDP51689 593 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 TECRLQ5HYJ1 363 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 TMEM215Q68D42 235 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 GDPD4Q6W3E5 623 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 BNC2Q6ZN30 1099 aaPredicted RBP16.65■□□□□ 0.26
CPSF4-201ENST00000292476 DPY19L3Q6ZPD9 716 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 SNX32Q86XE0 403 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 SLC22A9Q8IVM8 553 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 OR13C4Q8NGS5 318 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 PYDC1Q8WXC3 89 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.65■□□□□ 0.26
CPSF4-201ENST00000292476 MRGPRX3Q96LB0 322 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 BTBD9Q96Q07 612 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 MYADMQ96S97 322 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 KLHL4Q9C0H6 718 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 FAM192AQ9GZU8 254 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 ZDHHC6Q9H6R6 413 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 ZFYVE1Q9HBF4 777 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 EML4Q9HC35 981 aaKnown RBP16.65■□□□□ 0.26
CPSF4-201ENST00000292476 IGSF5Q9NSI5 407 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 DLGAP2Q9P1A6 1054 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 KCTD3Q9Y597 815 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 DOCK8Q8NF50 2099 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 CAPN8A6NHC0 703 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 BNIP3LO60238 219 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 LTA4HP09960 611 aaKnown RBP16.65■□□□□ 0.26
CPSF4-201ENST00000292476 NUDT2P50583 147 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 CLCN2P51788 898 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 DLG1Q12959 904 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 ZDHHC20Q5W0Z9 365 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 HPS6Q86YV9 775 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 DSELQ8IZU8 1212 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 TTC30BQ8N4P2 665 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 TXNDC5Q8NBS9 432 aaKnown RBP16.65■□□□□ 0.26
CPSF4-201ENST00000292476 ST13P5Q8NFI4 369 aaPredicted RBP16.65■□□□□ 0.26
CPSF4-201ENST00000292476 OR2A12Q8NGT7 310 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 CEP70Q8NHQ1 597 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 FRS2Q8WU20 508 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 HEXDCQ8WVB3 486 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 DLG3Q92796 817 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 SCRN2Q96FV2 425 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 ZFYVE19Q96K21 471 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 OMDQ99983 421 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 TRMOQ9BU70 441 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 TRMT61BQ9BVS5 477 aaKnown RBP16.65■□□□□ 0.26
CPSF4-201ENST00000292476 NUF2Q9BZD4 464 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 WDR55Q9H6Y2 383 aaPredicted RBP16.65■□□□□ 0.26
CPSF4-201ENST00000292476 MRPL40Q9NQ50 206 aaKnown RBP16.65■□□□□ 0.26
CPSF4-201ENST00000292476 HPS4Q9NQG7 708 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 UTP6Q9NYH9 597 aaKnown RBP16.65■□□□□ 0.26
CPSF4-201ENST00000292476 IL17CQ9P0M4 197 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 LIMD1Q9UGP4 676 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 APPL1Q9UKG1 709 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 PSMD13Q9UNM6 376 aa16.65■□□□□ 0.26
CPSF4-201ENST00000292476 MYO10Q9HD67 2058 aa16.64■□□□□ 0.25
CPSF4-201ENST00000292476 ASGR2P07307 311 aa16.64■□□□□ 0.25
CPSF4-201ENST00000292476 EPHA3P29320 983 aa16.64■□□□□ 0.25
CPSF4-201ENST00000292476 TTPAP49638 278 aa16.64■□□□□ 0.25
CPSF4-201ENST00000292476 ACAP2Q15057 778 aa16.64■□□□□ 0.25
CPSF4-201ENST00000292476 MAPRE2Q15555 327 aa16.64■□□□□ 0.25
CPSF4-201ENST00000292476 TYSND1Q2T9J0 566 aa16.64■□□□□ 0.25
CPSF4-201ENST00000292476 PIGGQ5H8A4 983 aa16.64■□□□□ 0.25
CPSF4-201ENST00000292476 FAM45BPQ6NSW5 357 aa16.64■□□□□ 0.25
CPSF4-201ENST00000292476 CERS6Q6ZMG9 384 aa16.64■□□□□ 0.25
CPSF4-201ENST00000292476 TRIM67Q6ZTA4 783 aa16.64■□□□□ 0.25
CPSF4-201ENST00000292476 TPRG1Q6ZUI0 275 aa16.64■□□□□ 0.25
CPSF4-201ENST00000292476 Q6ZVU0 165 aa16.64■□□□□ 0.25
CPSF4-201ENST00000292476 PIP4K2CQ8TBX8 421 aa16.64■□□□□ 0.25
CPSF4-201ENST00000292476 FAM45AQ8TCE6 357 aa16.64■□□□□ 0.25
CPSF4-201ENST00000292476 SHCBP1LQ9BZQ2 653 aa16.64■□□□□ 0.25
CPSF4-201ENST00000292476 EFCAB1Q9HAE3 211 aa16.64■□□□□ 0.25
CPSF4-201ENST00000292476 H3BNX3 289 aa16.63■□□□□ 0.25
CPSF4-201ENST00000292476 SDHDO14521 159 aa16.63■□□□□ 0.25
CPSF4-201ENST00000292476 NEMP1O14524 444 aa16.63■□□□□ 0.25
CPSF4-201ENST00000292476 S1PR4O95977 384 aa16.63■□□□□ 0.25
CPSF4-201ENST00000292476 STC1P52823 247 aa16.63■□□□□ 0.25
CPSF4-201ENST00000292476 INHBCP55103 352 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms