RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 SEPT6Q14141 434 aa20.18■□□□□ 0.82
RAB28-201ENST00000288723 SEPT7Q16181 437 aaKnown RBP20.18■□□□□ 0.82
RAB28-201ENST00000288723 LDLRAP1Q5SW96 308 aa20.18■□□□□ 0.82
RAB28-201ENST00000288723 C11orf96Q7Z7L8 435 aa20.18■□□□□ 0.82
RAB28-201ENST00000288723 DDHD1Q8NEL9 900 aa20.18■□□□□ 0.82
RAB28-201ENST00000288723 DNAJC1Q96KC8 554 aaKnown RBP20.18■□□□□ 0.82
RAB28-201ENST00000288723 EPB41L5Q9HCM4 733 aa20.18■□□□□ 0.82
RAB28-201ENST00000288723 RAB6BQ9NRW1 208 aa20.18■□□□□ 0.82
RAB28-201ENST00000288723 ACACAQ13085 2346 aa20.18■□□□□ 0.82
RAB28-201ENST00000288723 UNC13CQ8NB66 2214 aa20.18■□□□□ 0.82
RAB28-201ENST00000288723 OR2AG2A6NM03 316 aa20.18■□□□□ 0.82
RAB28-201ENST00000288723 TLX3O43711 291 aaPredicted RBP20.18■□□□□ 0.82
RAB28-201ENST00000288723 F3P13726 295 aa20.18■□□□□ 0.82
RAB28-201ENST00000288723 PDE1BQ01064 536 aa20.18■□□□□ 0.82
RAB28-201ENST00000288723 NFATC2Q13469 925 aa20.18■□□□□ 0.82
RAB28-201ENST00000288723 GTF2H3Q13889 308 aa20.18■□□□□ 0.82
RAB28-201ENST00000288723 DET1Q7L5Y6 550 aa20.18■□□□□ 0.82
RAB28-201ENST00000288723 ANP32BQ92688 251 aaKnown RBP20.18■□□□□ 0.82
RAB28-201ENST00000288723 POLR1BQ9H9Y6 1135 aa20.18■□□□□ 0.82
RAB28-201ENST00000288723 SCHIP1Q9P0W5 487 aaPredicted RBP20.18■□□□□ 0.82
RAB28-201ENST00000288723 JRKLQ9Y4A0 524 aa20.18■□□□□ 0.82
RAB28-201ENST00000288723 RPL10P27635 214 aaKnown RBP20.17■□□□□ 0.82
RAB28-201ENST00000288723 CD1CP29017 333 aa20.17■□□□□ 0.82
RAB28-201ENST00000288723 AKT1P31749 480 aa20.17■□□□□ 0.82
RAB28-201ENST00000288723 RPL22P35268 128 aaKnown RBP20.17■□□□□ 0.82
RAB28-201ENST00000288723 FDFT1P37268 417 aa20.17■□□□□ 0.82
RAB28-201ENST00000288723 LSSP48449 732 aa20.17■□□□□ 0.82
RAB28-201ENST00000288723 LMAN1P49257 510 aa20.17■□□□□ 0.82
RAB28-201ENST00000288723 INHBCP55103 352 aa20.17■□□□□ 0.82
RAB28-201ENST00000288723 NR1D2Q14995 579 aa20.17■□□□□ 0.82
RAB28-201ENST00000288723 CCDC38Q502W7 563 aa20.17■□□□□ 0.82
RAB28-201ENST00000288723 SLC35F6Q8N357 371 aa20.17■□□□□ 0.82
RAB28-201ENST00000288723 DNAAF3Q8N9W5 541 aa20.17■□□□□ 0.82
RAB28-201ENST00000288723 CCDC97Q96F63 343 aaPredicted RBP20.17■□□□□ 0.82
RAB28-201ENST00000288723 MS4A14Q96JA4 679 aa20.17■□□□□ 0.82
RAB28-201ENST00000288723 NUDT22Q9BRQ3 303 aa20.17■□□□□ 0.82
RAB28-201ENST00000288723 SMOXQ9NWM0 555 aa20.17■□□□□ 0.82
RAB28-201ENST00000288723 E7EVH7 732 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 ZSCAN12O43309 604 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 GPR3P46089 330 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 FASLGP48023 281 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 CLCNKAP51800 687 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 DRG2P55039 364 aaKnown RBP20.16■□□□□ 0.82
RAB28-201ENST00000288723 HHEXQ03014 270 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 MAP9Q49MG5 647 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 DRICH1Q6PGQ1 229 aaPredicted RBP20.16■□□□□ 0.82
RAB28-201ENST00000288723 TMEM220Q6QAJ8 160 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 GSTA5Q7RTV2 222 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 LINC00523Q86TU6 105 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 MAIP1Q8WWC4 291 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 GRAMD1AQ96CP6 724 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 SGF29Q96ES7 293 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 DCBLD2Q96PD2 775 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 TIMM29Q9BSF4 260 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 SEMA6CQ9H3T2 930 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 KCNK4Q9NYG8 393 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 PAK5Q9P286 719 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 DRG1Q9Y295 367 aaKnown RBP20.16■□□□□ 0.82
RAB28-201ENST00000288723 ZFHX4Q86UP3 3567 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 KIF26BQ2KJY2 2108 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 PKD1L2Q7Z442 2459 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 POP7O75817 140 aaKnown RBP20.16■□□□□ 0.82
RAB28-201ENST00000288723 PRSS56P0CW18 603 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 MSH3P20585 1137 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 HADHAP40939 763 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 CDKN1CP49918 316 aaPredicted RBP20.16■□□□□ 0.82
RAB28-201ENST00000288723 SEMA5AQ13591 1074 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.16■□□□□ 0.82
RAB28-201ENST00000288723 PIM3Q86V86 326 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 BEND7Q8N7W2 519 aaPredicted RBP20.16■□□□□ 0.82
RAB28-201ENST00000288723 PRELID2Q8N945 189 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 PRR11Q96HE9 360 aaPredicted RBP20.16■□□□□ 0.82
RAB28-201ENST00000288723 PDLIM2Q96JY6 352 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 SLC38A3Q99624 504 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 ZCCHC2Q9C0B9 1178 aaKnown RBP20.16■□□□□ 0.82
RAB28-201ENST00000288723 CRLS1Q9UJA2 301 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 ZKSCAN5Q9Y2L8 839 aa20.16■□□□□ 0.82
RAB28-201ENST00000288723 URB1O60287 2271 aaKnown RBP20.15■□□□□ 0.82
RAB28-201ENST00000288723 IGHV1OR21-1A0A087WYE8 117 aa20.15■□□□□ 0.82
RAB28-201ENST00000288723 PRR19A6NJB7 356 aa20.15■□□□□ 0.82
RAB28-201ENST00000288723 PDZK1P1A8MUH7 402 aa20.15■□□□□ 0.82
RAB28-201ENST00000288723 CPNE6O95741 557 aa20.15■□□□□ 0.82
RAB28-201ENST00000288723 APRTP07741 180 aa20.15■□□□□ 0.82
RAB28-201ENST00000288723 HGFP14210 728 aa20.15■□□□□ 0.82
RAB28-201ENST00000288723 HOXB3P14651 431 aaPredicted RBP20.15■□□□□ 0.82
RAB28-201ENST00000288723 PBLDP30039 288 aaPredicted RBP20.15■□□□□ 0.82
RAB28-201ENST00000288723 MC4RP32245 332 aa20.15■□□□□ 0.82
RAB28-201ENST00000288723 ZFP36L1Q07352 338 aaKnown RBP20.15■□□□□ 0.82
RAB28-201ENST00000288723 FNBP1LQ5T0N5 605 aa20.15■□□□□ 0.82
RAB28-201ENST00000288723 PPP1R21Q6ZMI0 780 aa20.15■□□□□ 0.82
RAB28-201ENST00000288723 ZNF574Q6ZN55 896 aaPredicted RBP20.15■□□□□ 0.82
RAB28-201ENST00000288723 TMEM74Q96NL1 305 aa20.15■□□□□ 0.82
RAB28-201ENST00000288723 SARS2Q9NP81 518 aaKnown RBP20.15■□□□□ 0.82
RAB28-201ENST00000288723 NLE1Q9NVX2 485 aaPredicted RBP20.15■□□□□ 0.82
RAB28-201ENST00000288723 SMARCAL1Q9NZC9 954 aa20.15■□□□□ 0.82
RAB28-201ENST00000288723 CCDC187A0A096LP49 1063 aa20.14■□□□□ 0.81
RAB28-201ENST00000288723 USP27XA6NNY8 438 aa20.14■□□□□ 0.81
RAB28-201ENST00000288723 ERI2A8K979 691 aaKnown RBP20.14■□□□□ 0.81
RAB28-201ENST00000288723 SUN1O94901 812 aa20.14■□□□□ 0.81
RAB28-201ENST00000288723 BRAFP15056 766 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms