RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 ABCB7O75027 752 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 JRKO75564 520 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 PRSS23O95084 383 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 RPLP2P05387 115 aaKnown RBP10.29□□□□□ -0.76
SKA1-201ENST00000285116 ZNF37AP17032 561 aaPredicted RBP10.29□□□□□ -0.76
SKA1-201ENST00000285116 HTR1EP28566 365 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 ZFP36L2P47974 494 aaKnown RBP10.29□□□□□ -0.76
SKA1-201ENST00000285116 HNRNPFP52597 415 aaKnown RBP10.29□□□□□ -0.76
SKA1-201ENST00000285116 LCP2Q13094 533 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 FAM110CQ1W6H9 321 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 XKR7Q5GH72 579 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 GPR158Q5T848 1215 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 ALG1LQ6GMV1 187 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 TMEM214Q6NUQ4 689 aaKnown RBP10.29□□□□□ -0.76
SKA1-201ENST00000285116 ZNF549Q6P9A3 640 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 TLK2Q86UE8 772 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 SLC7A5P1Q8MH63 180 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 S100ZQ8WXG8 99 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 PHF21BQ96EK2 531 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 UROC1Q96N76 676 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 CSF3RQ99062 836 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 DERL2Q9GZP9 239 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 KLHL25Q9H0H3 589 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 NDFIP2Q9NV92 336 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 AIG1Q9NVV5 245 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 GMIPQ9P107 970 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 ARL5CA6NH57 179 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 FAM47E-STBD1D6RA91 191 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 NR5A2O00482 541 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 ZNF623O75123 536 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 UGT2B4P06133 528 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 RPS17P08708 135 aaKnown RBP10.29□□□□□ -0.76
SKA1-201ENST00000285116 ARSAP15289 507 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 TYMPP19971 482 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 MRPS6P82932 125 aaKnown RBP10.29□□□□□ -0.76
SKA1-201ENST00000285116 PLCL1Q15111 1095 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 CRY1Q16526 586 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 SIRPB2Q5JXA9 342 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 XAF1Q6GPH4 301 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 RGMBQ6NW40 437 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 CD300LGQ6UXG3 332 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 TFAP2DQ7Z6R9 452 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 SCD5Q86SK9 330 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 PROSER1Q86XN7 944 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 ANKRD13BQ86YJ7 626 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 PARP8Q8N3A8 854 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 ARRDC2Q8TBH0 407 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 MAGEE2Q8TD90 523 aaPredicted RBP10.29□□□□□ -0.76
SKA1-201ENST00000285116 OSCP1Q8WVF1 389 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 KIAA1191Q96A73 305 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 LHPPQ9H008 270 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 SIK2Q9H0K1 926 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 TUBB1Q9H4B7 451 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 FBRSL1Q9HCM7 1045 aaKnown RBP10.29□□□□□ -0.76
SKA1-201ENST00000285116 ANKMY1Q9P2S6 941 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 POLG2Q9UHN1 485 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 BPTFQ12830 3046 aa10.29□□□□□ -0.76
SKA1-201ENST00000285116 UBXN8O00124 270 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 STK25O00506 426 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 PIP5K1BO14986 540 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 FGF1P05230 155 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 ZNF865P0CJ78 1059 aaPredicted RBP10.28□□□□□ -0.76
SKA1-201ENST00000285116 HLA-DPA1P20036 260 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 BDNFP23560 247 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 PERM1Q5SV97 790 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 MRNIPQ6NTE8 343 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 DPP10Q8N608 796 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 PTGR2Q8N8N7 351 aaPredicted RBP10.28□□□□□ -0.76
SKA1-201ENST00000285116 AARSD1Q9BTE6 412 aaKnown RBP10.28□□□□□ -0.76
SKA1-201ENST00000285116 AKIP1Q9NQ31 210 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 SACM1LQ9NTJ5 587 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 MIOSQ9NXC5 875 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 ZIM2Q9NZV7 527 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 KLHL3Q9UH77 587 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 TRPV2Q9Y5S1 764 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 ST14Q9Y5Y6 855 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 OAS3Q9Y6K5 1087 aaKnown RBP10.28□□□□□ -0.76
SKA1-201ENST00000285116 INPPL1O15357 1258 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 SYNCRIPO60506 623 aaKnown RBP10.28□□□□□ -0.76
SKA1-201ENST00000285116 SNAP29O95721 258 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 ALBP02768 609 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 TGM1P22735 817 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 GSTM2P28161 218 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 OXTRP30559 389 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 ARSDP51689 593 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 PLK1P53350 603 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 RAD23AP54725 363 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 IL10RBQ08334 325 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 OR4D1Q15615 310 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 KIF19Q2TAC6 998 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 LDLRAP1Q5SW96 308 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 MORN1Q5T089 497 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 MARC1Q5VT66 337 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 RASAL3Q86YV0 1011 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 GALNT13Q8IUC8 556 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 RNF135Q8IUD6 432 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 BPIFB1Q8TDL5 484 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 ISG20Q96AZ6 181 aaKnown RBP10.28□□□□□ -0.76
SKA1-201ENST00000285116 ZNF599Q96NL3 588 aa10.28□□□□□ -0.76
SKA1-201ENST00000285116 RDH12Q96NR8 316 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms