RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 MYO1FO00160 1098 aa8.82□□□□□ -1
TPM3-201ENST00000271850 TIAF1O95411 115 aa8.82□□□□□ -1
TPM3-201ENST00000271850 MBD3O95983 291 aa8.82□□□□□ -1
TPM3-201ENST00000271850 PDGFAP04085 211 aa8.82□□□□□ -1
TPM3-201ENST00000271850 SERPING1P05155 500 aa8.82□□□□□ -1
TPM3-201ENST00000271850 PYGLP06737 847 aa8.82□□□□□ -1
TPM3-201ENST00000271850 ANKRD34CP0C6C1 535 aa8.82□□□□□ -1
TPM3-201ENST00000271850 SFTPCP11686 197 aa8.82□□□□□ -1
TPM3-201ENST00000271850 KDELR1P24390 212 aa8.82□□□□□ -1
TPM3-201ENST00000271850 NFKBIAP25963 317 aa8.82□□□□□ -1
TPM3-201ENST00000271850 MAPK9P45984 424 aa8.82□□□□□ -1
TPM3-201ENST00000271850 NOP2P46087 812 aaKnown RBP8.82□□□□□ -1
TPM3-201ENST00000271850 IFI35P80217 286 aaPredicted RBP8.82□□□□□ -1
TPM3-201ENST00000271850 ZBED6P86452 979 aa8.82□□□□□ -1
TPM3-201ENST00000271850 FANCCQ00597 558 aa8.82□□□□□ -1
TPM3-201ENST00000271850 PPIDQ08752 370 aaKnown RBP8.82□□□□□ -1
TPM3-201ENST00000271850 ABHD18Q0P651 414 aa8.82□□□□□ -1
TPM3-201ENST00000271850 BIRC2Q13490 618 aa8.82□□□□□ -1
TPM3-201ENST00000271850 NOMO1Q15155 1222 aa8.82□□□□□ -1
TPM3-201ENST00000271850 FILIP1LQ4L180 1135 aa8.82□□□□□ -1
TPM3-201ENST00000271850 CCDC122Q5T0U0 273 aa8.82□□□□□ -1
TPM3-201ENST00000271850 SLC9A4Q6AI14 798 aa8.82□□□□□ -1
TPM3-201ENST00000271850 TIGD7Q6NT04 549 aaPredicted RBP8.82□□□□□ -1
TPM3-201ENST00000271850 CAVIN1Q6NZI2 390 aaKnown RBP8.82□□□□□ -1
TPM3-201ENST00000271850 CRTC3Q6UUV7 619 aa8.82□□□□□ -1
TPM3-201ENST00000271850 TMC3Q7Z5M5 1100 aa8.82□□□□□ -1
TPM3-201ENST00000271850 CCDC13Q8IYE1 715 aa8.82□□□□□ -1
TPM3-201ENST00000271850 SPATA22Q8NHS9 363 aa8.82□□□□□ -1
TPM3-201ENST00000271850 CPLX3Q8WVH0 158 aa8.82□□□□□ -1
TPM3-201ENST00000271850 STARD8Q92502 1023 aa8.82□□□□□ -1
TPM3-201ENST00000271850 IMP4Q96G21 291 aaKnown RBP8.82□□□□□ -1
TPM3-201ENST00000271850 ABHD17AQ96GS6 310 aa8.82□□□□□ -1
TPM3-201ENST00000271850 AHCYL2Q96HN2 611 aaKnown RBP8.82□□□□□ -1
TPM3-201ENST00000271850 C9orf72Q96LT7 481 aa8.82□□□□□ -1
TPM3-201ENST00000271850 RNF157Q96PX1 679 aa8.82□□□□□ -1
TPM3-201ENST00000271850 TEFMQ96QE5 360 aaKnown RBP8.82□□□□□ -1
TPM3-201ENST00000271850 RUFY1Q96T51 708 aa8.82□□□□□ -1
TPM3-201ENST00000271850 HERPUD2Q9BSE4 406 aa8.82□□□□□ -1
TPM3-201ENST00000271850 AKIRIN1Q9H9L7 192 aaPredicted RBP8.82□□□□□ -1
TPM3-201ENST00000271850 GPN2Q9H9Y4 310 aaPredicted RBP8.82□□□□□ -1
TPM3-201ENST00000271850 KLC4Q9NSK0 619 aa8.82□□□□□ -1
TPM3-201ENST00000271850 NFKBIL1Q9UBC1 381 aaPredicted RBP8.82□□□□□ -1
TPM3-201ENST00000271850 CAPN11Q9UMQ6 739 aa8.82□□□□□ -1
TPM3-201ENST00000271850 SHOC2Q9UQ13 582 aa8.82□□□□□ -1
TPM3-201ENST00000271850 WDR37Q9Y2I8 494 aa8.82□□□□□ -1
TPM3-201ENST00000271850 KIR2DS5A0A0G2JLQ3 304 aa8.81□□□□□ -1
TPM3-201ENST00000271850 A0A0G2JNG1 304 aa8.81□□□□□ -1
TPM3-201ENST00000271850 RGSL1A5PLK6 1076 aa8.81□□□□□ -1
TPM3-201ENST00000271850 OR52A4PA6NMU1 304 aa8.81□□□□□ -1
TPM3-201ENST00000271850 KIR2DS3K7RE56 304 aa8.81□□□□□ -1
TPM3-201ENST00000271850 GAPDHSO14556 408 aaPredicted RBP8.81□□□□□ -1
TPM3-201ENST00000271850 MAN1A2O60476 641 aa8.81□□□□□ -1
TPM3-201ENST00000271850 MT-CYBP00156 380 aaPredicted RBP8.81□□□□□ -1
TPM3-201ENST00000271850 BPIP17213 487 aa8.81□□□□□ -1
TPM3-201ENST00000271850 TYRP1P17643 537 aa8.81□□□□□ -1
TPM3-201ENST00000271850 XRCC1P18887 633 aaPredicted RBP8.81□□□□□ -1
TPM3-201ENST00000271850 CES1P23141 567 aa8.81□□□□□ -1
TPM3-201ENST00000271850 VARSP26640 1264 aaKnown RBP8.81□□□□□ -1
TPM3-201ENST00000271850 MAP4P27816 1152 aaKnown RBP8.81□□□□□ -1
TPM3-201ENST00000271850 CD68P34810 354 aaPredicted RBP8.81□□□□□ -1
TPM3-201ENST00000271850 CASRP41180 1078 aa8.81□□□□□ -1
TPM3-201ENST00000271850 SSR1P43307 286 aaKnown RBP8.81□□□□□ -1
TPM3-201ENST00000271850 CCR10P46092 362 aa8.81□□□□□ -1
TPM3-201ENST00000271850 WDR4P57081 412 aaKnown RBP8.81□□□□□ -1
TPM3-201ENST00000271850 DCDC1P59894 354 aa8.81□□□□□ -1
TPM3-201ENST00000271850 GUCA2AQ02747 115 aa8.81□□□□□ -1
TPM3-201ENST00000271850 PEX6Q13608 980 aa8.81□□□□□ -1
TPM3-201ENST00000271850 LAMB3Q13751 1172 aa8.81□□□□□ -1
TPM3-201ENST00000271850 KIR2DS5Q14953 304 aa8.81□□□□□ -1
TPM3-201ENST00000271850 PDK2Q15119 407 aa8.81□□□□□ -1
TPM3-201ENST00000271850 SEPT7Q16181 437 aaKnown RBP8.81□□□□□ -1
TPM3-201ENST00000271850 DEFB109BQ30KR1 87 aa8.81□□□□□ -1
TPM3-201ENST00000271850 CEACAM20Q6UY09 585 aa8.81□□□□□ -1
TPM3-201ENST00000271850 CERS6Q6ZMG9 384 aa8.81□□□□□ -1
TPM3-201ENST00000271850 TMEM26Q6ZUK4 368 aa8.81□□□□□ -1
TPM3-201ENST00000271850 MICALCLQ6ZW33 695 aa8.81□□□□□ -1
TPM3-201ENST00000271850 KDELC2Q7Z4H8 507 aa8.81□□□□□ -1
TPM3-201ENST00000271850 SLC9B2Q86UD5 537 aa8.81□□□□□ -1
TPM3-201ENST00000271850 KCTD6Q8NC69 237 aa8.81□□□□□ -1
TPM3-201ENST00000271850 CCDC112Q8NEF3 446 aa8.81□□□□□ -1
TPM3-201ENST00000271850 GPR150Q8NGU9 434 aa8.81□□□□□ -1
TPM3-201ENST00000271850 GLYATL1Q969I3 302 aa8.81□□□□□ -1
TPM3-201ENST00000271850 MLPHQ9BV36 600 aaPredicted RBP8.81□□□□□ -1
TPM3-201ENST00000271850 RMI1Q9H9A7 625 aa8.81□□□□□ -1
TPM3-201ENST00000271850 UCK1Q9HA47 277 aa8.81□□□□□ -1
TPM3-201ENST00000271850 PKD2L2Q9NZM6 624 aa8.81□□□□□ -1
TPM3-201ENST00000271850 ANKMY1Q9P2S6 941 aa8.81□□□□□ -1
TPM3-201ENST00000271850 CROTQ9UKG9 612 aa8.81□□□□□ -1
TPM3-201ENST00000271850 DNPEPQ9ULA0 475 aa8.81□□□□□ -1
TPM3-201ENST00000271850 PLAAQ9Y263 795 aa8.81□□□□□ -1
TPM3-201ENST00000271850 ZNF711Q9Y462 761 aa8.81□□□□□ -1
TPM3-201ENST00000271850 KCNMB2Q9Y691 235 aa8.81□□□□□ -1
TPM3-201ENST00000271850 RPS6KL1Q9Y6S9 549 aa8.81□□□□□ -1
TPM3-201ENST00000271850 PCSK5Q92824 1860 aa8.81□□□□□ -1
TPM3-201ENST00000271850 TEX15Q9BXT5 2789 aa8.8□□□□□ -1
TPM3-201ENST00000271850 GOLGA6L3A6NEY3 463 aa8.8□□□□□ -1
TPM3-201ENST00000271850 POLR1CO15160 346 aaPredicted RBP8.8□□□□□ -1
TPM3-201ENST00000271850 ZW10O43264 779 aa8.8□□□□□ -1
TPM3-201ENST00000271850 UBXN7O94888 489 aa8.8□□□□□ -1
TPM3-201ENST00000271850 SERPINC1P01008 464 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms