RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 CTU1Q7Z7A3 348 aaKnown RBP11.47□□□□□ -0.57
VPS33A-201ENST00000267199 TMEM130Q8N3G9 435 aa11.47□□□□□ -0.57
VPS33A-201ENST00000267199 PTCD2Q8WV60 388 aaKnown RBP11.47□□□□□ -0.57
VPS33A-201ENST00000267199 RBM4BQ9BQ04 359 aaKnown RBP11.47□□□□□ -0.57
VPS33A-201ENST00000267199 RBM4Q9BWF3 364 aaKnown RBP11.47□□□□□ -0.57
VPS33A-201ENST00000267199 SLC39A8Q9C0K1 460 aa11.47□□□□□ -0.57
VPS33A-201ENST00000267199 SLC25A51Q9H1U9 297 aa11.47□□□□□ -0.57
VPS33A-201ENST00000267199 ZBTB26Q9HCK0 441 aa11.47□□□□□ -0.57
VPS33A-201ENST00000267199 CCNB1IP1Q9NPC3 277 aa11.47□□□□□ -0.57
VPS33A-201ENST00000267199 TRPV5Q9NQA5 729 aa11.47□□□□□ -0.57
VPS33A-201ENST00000267199 EBF1Q9UH73 591 aa11.47□□□□□ -0.57
VPS33A-201ENST00000267199 PCDHB9Q9Y5E1 797 aa11.47□□□□□ -0.57
VPS33A-201ENST00000267199 SIPA1L3O60292 1781 aaPredicted RBP11.46□□□□□ -0.57
VPS33A-201ENST00000267199 PLOD3O60568 738 aa11.46□□□□□ -0.57
VPS33A-201ENST00000267199 PENKP01210 267 aaPredicted RBP11.46□□□□□ -0.57
VPS33A-201ENST00000267199 CYP3A5P20815 502 aa11.46□□□□□ -0.57
VPS33A-201ENST00000267199 CDC42P60953 191 aa11.46□□□□□ -0.57
VPS33A-201ENST00000267199 CLCQ05315 142 aa11.46□□□□□ -0.57
VPS33A-201ENST00000267199 TAF10Q12962 218 aa11.46□□□□□ -0.57
VPS33A-201ENST00000267199 IL18R1Q13478 541 aa11.46□□□□□ -0.57
VPS33A-201ENST00000267199 CHSY3Q70JA7 882 aa11.46□□□□□ -0.57
VPS33A-201ENST00000267199 ROPN1LQ96C74 230 aa11.46□□□□□ -0.57
VPS33A-201ENST00000267199 CRISPLD1Q9H336 500 aa11.46□□□□□ -0.57
VPS33A-201ENST00000267199 MANSC4A6NHS7 340 aaPredicted RBP11.46□□□□□ -0.57
VPS33A-201ENST00000267199 K7EPI3 171 aa11.46□□□□□ -0.57
VPS33A-201ENST00000267199 ZBTB14O43829 449 aa11.46□□□□□ -0.57
VPS33A-201ENST00000267199 COL6A1P12109 1028 aa11.46□□□□□ -0.57
VPS33A-201ENST00000267199 WEE1P30291 646 aa11.46□□□□□ -0.57
VPS33A-201ENST00000267199 SCNN1AP37088 669 aa11.46□□□□□ -0.57
VPS33A-201ENST00000267199 TUFMP49411 452 aaKnown RBP11.46□□□□□ -0.57
VPS33A-201ENST00000267199 CLDN10P78369 228 aa11.46□□□□□ -0.57
VPS33A-201ENST00000267199 NOMO2Q5JPE7 1267 aa11.46□□□□□ -0.57
VPS33A-201ENST00000267199 DEFB128Q7Z7B8 93 aa11.46□□□□□ -0.57
VPS33A-201ENST00000267199 ZC3H7AQ8IWR0 971 aaKnown RBP11.46□□□□□ -0.57
VPS33A-201ENST00000267199 PDLIM7Q9NR12 457 aa11.46□□□□□ -0.57
VPS33A-201ENST00000267199 PSME2Q9UL46 239 aa11.46□□□□□ -0.57
VPS33A-201ENST00000267199 SESN1Q9Y6P5 492 aa11.46□□□□□ -0.57
VPS33A-201ENST00000267199 FBP2O00757 339 aa11.46□□□□□ -0.58
VPS33A-201ENST00000267199 URODP06132 367 aa11.46□□□□□ -0.58
VPS33A-201ENST00000267199 ATN1P54259 1190 aaPredicted RBP11.46□□□□□ -0.58
VPS33A-201ENST00000267199 PLD1Q13393 1074 aa11.46□□□□□ -0.58
VPS33A-201ENST00000267199 FAM110CQ1W6H9 321 aa11.46□□□□□ -0.58
VPS33A-201ENST00000267199 TSTD2Q5T7W7 516 aa11.46□□□□□ -0.58
VPS33A-201ENST00000267199 CYP4Z1Q86W10 505 aa11.46□□□□□ -0.58
VPS33A-201ENST00000267199 NTAN1Q96AB6 310 aa11.46□□□□□ -0.58
VPS33A-201ENST00000267199 PRRG3Q9BZD7 231 aa11.46□□□□□ -0.58
VPS33A-201ENST00000267199 GMIPQ9P107 970 aa11.46□□□□□ -0.58
VPS33A-201ENST00000267199 MTRRQ9UBK8 725 aa11.46□□□□□ -0.58
VPS33A-201ENST00000267199 RPS6KA6Q9UK32 745 aa11.46□□□□□ -0.58
VPS33A-201ENST00000267199 PADI3Q9ULW8 664 aa11.46□□□□□ -0.58
VPS33A-201ENST00000267199 ERGIC3Q9Y282 383 aa11.46□□□□□ -0.58
VPS33A-201ENST00000267199 PRKAB1Q9Y478 270 aa11.46□□□□□ -0.58
VPS33A-201ENST00000267199 CITO14578 2027 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 ELOVL7A1L3X0 281 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 hCG_2039718K7EN88 272 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 SERPINA1P01009 418 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 CTPS1P17812 591 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 BCAP31P51572 246 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 IRF8Q02556 426 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 MTA1Q13330 715 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 RABL3Q5HYI8 236 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 THOC7Q6I9Y2 204 aaKnown RBP11.45□□□□□ -0.58
VPS33A-201ENST00000267199 FGD2Q7Z6J4 655 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 ADGRG6Q86SQ4 1221 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 UROC1Q96N76 676 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 AGO1Q9UL18 857 aaKnown RBP11.45□□□□□ -0.58
VPS33A-201ENST00000267199 NRP1O14786 923 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 NPHS1O60500 1241 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 OR4F21O95013 312 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 SEMA3DO95025 777 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 DGKAP23743 735 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 MC4RP32245 332 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 GGT5P36269 586 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 GPR15P49685 360 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 ARPC4P59998 168 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 PITX1P78337 314 aaPredicted RBP11.45□□□□□ -0.58
VPS33A-201ENST00000267199 MXD1Q05195 221 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 HECTD3Q5T447 861 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 INTS11Q5TA45 600 aaKnown RBP11.45□□□□□ -0.58
VPS33A-201ENST00000267199 DPY19L2P1Q6NXN4 242 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 PLET1Q6UQ28 207 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 FAM131AQ6UXB0 335 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 SLC22A16Q86VW1 577 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 RBM12BQ8IXT5 1001 aaKnown RBP11.45□□□□□ -0.58
VPS33A-201ENST00000267199 OR52J3Q8NH60 311 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 C17orf50Q8WW18 174 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 IRGQQ8WZA9 623 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 TOP1MTQ969P6 601 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 TMEM74Q96NL1 305 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 CD320Q9NPF0 282 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 ITM2CQ9NQX7 267 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 POLE4Q9NR33 117 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 DNMT3LQ9UJW3 386 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 PCP4L1A6NKN8 68 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 NT5C1B-RDH14C9J2C7 533 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 EPHB3P54753 998 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 CYP4F8P98187 520 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 HNRNPDQ14103 355 aaKnown RBP11.45□□□□□ -0.58
VPS33A-201ENST00000267199 CMPK2Q5EBM0 449 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 SLC34A3Q8N130 599 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms