RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 SEC13P55735 322 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 ECT2LQ008S8 904 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 ZIK1Q3SY52 487 aaPredicted RBP15.29■□□□□ 0.04
TIMP3-201ENST00000266085 FAM13CQ8NE31 585 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 HBEGFQ99075 208 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 PAAF1Q9BRP4 392 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 GPR62Q9BZJ7 368 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 KLHL3Q9UH77 587 aa15.29■□□□□ 0.04
TIMP3-201ENST00000266085 PRKCGP05129 697 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 MAGEA11P43364 429 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 SF1Q15637 639 aaKnown RBP15.28■□□□□ 0.04
TIMP3-201ENST00000266085 CPTPQ5TA50 214 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 B3GNT9Q6UX72 402 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 ISLR2Q6UXK2 745 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.28■□□□□ 0.04
TIMP3-201ENST00000266085 PHF10Q8WUB8 498 aaKnown RBP15.28■□□□□ 0.04
TIMP3-201ENST00000266085 ESAMQ96AP7 390 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 PPM1MQ96MI6 270 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 PEBP4Q96S96 227 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 TDP1Q9NUW8 608 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 INTS10Q9NVR2 710 aaKnown RBP15.28■□□□□ 0.04
TIMP3-201ENST00000266085 POLR3BQ9NW08 1133 aaPredicted RBP15.28■□□□□ 0.04
TIMP3-201ENST00000266085 CST1P01037 141 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 TRBC1P01850 177 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 CHRNA1P02708 482 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 MAT2AP31153 395 aaKnown RBP15.28■□□□□ 0.04
TIMP3-201ENST00000266085 CYP4F2P78329 520 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 C2orf27AQ580R0 203 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 C15orf39Q6ZRI6 1047 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 CAMKK1Q8N5S9 505 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 ZNF781Q8N8C0 355 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 LEMD2Q8NC56 503 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 PXYLP1Q8TE99 480 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 PCCBP05166 539 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 PEX6Q13608 980 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 MBLAC2Q68D91 279 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 SLC9A4Q6AI14 798 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 UNC5BQ8IZJ1 945 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 MTERF3Q96E29 417 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 DCUN1D5Q9BTE7 237 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 SUV39H2Q9H5I1 410 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 PDLIM7Q9NR12 457 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 MAGEL2Q9UJ55 1249 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 SLC9A8Q9Y2E8 581 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 SLC6A2P23975 617 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 ZNF132P52740 706 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 NRG1Q02297 640 aaPredicted RBP15.28■□□□□ 0.04
TIMP3-201ENST00000266085 IL23RQ5VWK5 629 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 VITQ6UXI7 678 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 LENG8Q96PV6 779 aaPredicted RBP15.28■□□□□ 0.04
TIMP3-201ENST00000266085 SLC17A6Q9P2U8 582 aa15.28■□□□□ 0.04
TIMP3-201ENST00000266085 MYH1P12882 1939 aa15.27■□□□□ 0.04
TIMP3-201ENST00000266085 CNTRLQ7Z7A1 2325 aa15.27■□□□□ 0.04
TIMP3-201ENST00000266085 UBXN8O00124 270 aa15.27■□□□□ 0.04
TIMP3-201ENST00000266085 SERPINB7O75635 380 aa15.27■□□□□ 0.04
TIMP3-201ENST00000266085 CNTN5O94779 1100 aa15.27■□□□□ 0.04
TIMP3-201ENST00000266085 ST13P50502 369 aaKnown RBP15.27■□□□□ 0.04
TIMP3-201ENST00000266085 GPAT3Q53EU6 434 aa15.27■□□□□ 0.04
TIMP3-201ENST00000266085 CARD16Q5EG05 197 aa15.27■□□□□ 0.04
TIMP3-201ENST00000266085 IRAK1BP1Q5VVH5 260 aa15.27■□□□□ 0.04
TIMP3-201ENST00000266085 EIF3MQ7L2H7 374 aaKnown RBP15.27■□□□□ 0.04
TIMP3-201ENST00000266085 EPHX4Q8IUS5 362 aa15.27■□□□□ 0.04
TIMP3-201ENST00000266085 ZNF366Q8N895 744 aa15.27■□□□□ 0.04
TIMP3-201ENST00000266085 SAMHD1Q9Y3Z3 626 aaKnown RBP15.27■□□□□ 0.04
TIMP3-201ENST00000266085 OR10H1Q9Y4A9 318 aa15.27■□□□□ 0.04
TIMP3-201ENST00000266085 MYL12BO14950 172 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 TM7SF2O76062 418 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 CYBAP13498 195 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 UQCRBP14927 111 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 TCF3P15923 654 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 UGT1A6P19224 532 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 UGT1A1P22309 533 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 UGT1A4P22310 534 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 ADSLP30566 484 aaPredicted RBP15.27■□□□□ 0.03
TIMP3-201ENST00000266085 UGT1A3P35503 534 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 UGT1A5P35504 534 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 TALDO1P37837 337 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 MANFP55145 182 aaKnown RBP15.27■□□□□ 0.03
TIMP3-201ENST00000266085 SMIM11AP58511 58 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 PITX1P78337 314 aaPredicted RBP15.27■□□□□ 0.03
TIMP3-201ENST00000266085 KLHL35Q6PF15 583 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 TMEM220Q6QAJ8 160 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 CNTD1Q8N815 330 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 RNFT2Q96EX2 444 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 TLR9Q9NR96 1032 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 CLDND1Q9NY35 253 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 ASLP04424 464 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 UROSP10746 265 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 RFC2P35250 354 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 CDC42P60953 191 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 HTRA3P83110 453 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 PAFAH1B3Q15102 231 aaKnown RBP15.27■□□□□ 0.03
TIMP3-201ENST00000266085 GSTA3Q16772 222 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 MS4A13Q5J8X5 152 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 PARGQ86W56 976 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 DSELQ8IZU8 1212 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 POF1BQ8WVV4 589 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 REXO5Q96IC2 774 aaKnown RBP15.27■□□□□ 0.03
TIMP3-201ENST00000266085 MS4A4AQ96JQ5 239 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 PAPOLBQ9NRJ5 636 aaKnown RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms