RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 SLC22A16Q86VW1 577 aa16.97■□□□□ 0.31
SRF-201ENST00000265354 P2RY8Q86VZ1 359 aa16.97■□□□□ 0.31
SRF-201ENST00000265354 CLIP4Q8N3C7 705 aa16.97■□□□□ 0.31
SRF-201ENST00000265354 CARNMT1Q8N4J0 409 aa16.97■□□□□ 0.31
SRF-201ENST00000265354 ITCHQ96J02 903 aa16.97■□□□□ 0.31
SRF-201ENST00000265354 RMND5AQ9H871 391 aa16.97■□□□□ 0.31
SRF-201ENST00000265354 MKS1Q9NXB0 559 aa16.97■□□□□ 0.31
SRF-201ENST00000265354 MTRRQ9UBK8 725 aa16.97■□□□□ 0.31
SRF-201ENST00000265354 TBKBP1A7MCY6 615 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 STBD1O95210 358 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 IFI30P13284 250 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 IMPDH1P20839 514 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 AGTR2P50052 363 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 TRAP1Q12931 704 aaKnown RBP16.96■□□□□ 0.31
SRF-201ENST00000265354 TYW3Q6IPR3 259 aaKnown RBP16.96■□□□□ 0.31
SRF-201ENST00000265354 AMER2Q8N7J2 671 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 ROPN1LQ96C74 230 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 INTS7Q9NVH2 962 aaKnown RBP16.96■□□□□ 0.31
SRF-201ENST00000265354 EFCAB10A6NFE3 127 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 BBIP1A8MTZ0 92 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 H3BN98 237 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 NEK5Q6P3R8 708 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 RRM2BQ7LG56 351 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 HS3ST5Q8IZT8 346 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 AURKBQ96GD4 344 aaPredicted RBP16.96■□□□□ 0.31
SRF-201ENST00000265354 ABCC13Q9NSE7 274 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 ARL15Q9NXU5 204 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 PDP1Q9P0J1 537 aaPredicted RBP16.96■□□□□ 0.31
SRF-201ENST00000265354 FUOMA2VDF0 154 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 NME4O00746 187 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 KPNA6O60684 536 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 IGFBP5P24593 272 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 ENPEPQ07075 957 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 HERC3Q15034 1050 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 OSTM1Q86WC4 334 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 SVOPQ8N4V2 548 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 HMCESQ96FZ2 354 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 PRRG3Q9BZD7 231 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 CXCL16Q9H2A7 254 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 PCDHB9Q9Y5E1 797 aa16.96■□□□□ 0.31
SRF-201ENST00000265354 NUP205Q92621 2012 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 AQP12BA6NM10 295 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 A8MV72 311 aaPredicted RBP16.95■□□□□ 0.3
SRF-201ENST00000265354 IL1BP01584 269 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 SMIM18P0DKX4 95 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 SMIM10L2AP0DMW4 78 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 SMIM10L2BP0DMW5 78 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 RELAQ04206 551 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 ARMCX4Q5H9R4 360 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 AQP12AQ8IXF9 295 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 VPS37AQ8NEZ2 397 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 HNRNPABQ99729 332 aaKnown RBP16.95■□□□□ 0.3
SRF-201ENST00000265354 KRT84Q9NSB2 600 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 SLC13A4Q9UKG4 626 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 URB1O60287 2271 aaKnown RBP16.95■□□□□ 0.3
SRF-201ENST00000265354 CCDC162PA2VCL2 907 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 C5orf58C9J3I9 102 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 ARVCFO00192 962 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 CLPXO76031 633 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 RHOCP08134 193 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 DPP6P42658 865 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 RAB14P61106 215 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 RHOAP61586 193 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 DAG1Q14118 895 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 CTXN3Q4LDR2 81 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 FAM91A1Q658Y4 838 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 GPR153Q6NV75 609 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 ANKRD49Q8WVL7 239 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 SERPINB11Q96P15 392 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 OLFM1Q99784 485 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 MAGEL2Q9UJ55 1249 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 IKZF3Q9UKT9 509 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 KLHL20Q9Y2M5 609 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 RNF11Q9Y3C5 154 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.95■□□□□ 0.3
SRF-201ENST00000265354 TCRBV5S1A1TA0A578 114 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 ZSCAN5BA6NJL1 495 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 ZNF197O14709 1029 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 LZTS3O60299 673 aaPredicted RBP16.95■□□□□ 0.3
SRF-201ENST00000265354 NIPSNAP2O75323 286 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 OXSR1O95747 527 aaPredicted RBP16.95■□□□□ 0.3
SRF-201ENST00000265354 PRLP01236 227 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 KRT6AP02538 564 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 KRT6BP04259 564 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 KRT6CP48668 564 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 SULT1C3Q6IMI6 304 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 SIDT2Q8NBJ9 832 aaKnown RBP16.95■□□□□ 0.3
SRF-201ENST00000265354 ATAD1Q8NBU5 361 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 PIK3C3Q8NEB9 887 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 WDR12Q9GZL7 423 aaKnown RBP16.95■□□□□ 0.3
SRF-201ENST00000265354 EHD1Q9H4M9 534 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 PRKAB1Q9Y478 270 aa16.95■□□□□ 0.3
SRF-201ENST00000265354 PHRF1Q9P1Y6 1649 aaKnown RBP16.95■□□□□ 0.3
SRF-201ENST00000265354 A0A1W2PQH9 124 aa16.94■□□□□ 0.3
SRF-201ENST00000265354 MATN3O15232 486 aa16.94■□□□□ 0.3
SRF-201ENST00000265354 MLYCDO95822 493 aa16.94■□□□□ 0.3
SRF-201ENST00000265354 DGKKQ5KSL6 1271 aa16.94■□□□□ 0.3
SRF-201ENST00000265354 CCSAPQ6IQ19 270 aaPredicted RBP16.94■□□□□ 0.3
SRF-201ENST00000265354 SDE2Q6IQ49 451 aa16.94■□□□□ 0.3
SRF-201ENST00000265354 UGT3A1Q6NUS8 523 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms