RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 SLC13A1Q9BZW2 595 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 MRM3Q9HC36 420 aaKnown RBP18.13■□□□□ 0.49
SDF4-201ENST00000263741 SMOXQ9NWM0 555 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 DNAJC6O75061 913 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 ARL4CP56559 192 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 CACNG1Q06432 222 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 PDIA2Q13087 525 aaKnown RBP18.13■□□□□ 0.49
SDF4-201ENST00000263741 ANKRD20A4Q4UJ75 823 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 SERPINA9Q86WD7 417 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 SLC25A45Q8N413 288 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 DDHD1Q8NEL9 900 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 ART4Q93070 314 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 CFAP36Q96G28 342 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 CAMK1GQ96NX5 476 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 CLPBQ9H078 707 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 TRIM39Q9HCM9 518 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 ZNHIT2Q9UHR6 403 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 RIMKLBQ9ULI2 386 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 GPSM3Q9Y4H4 160 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 ST14Q9Y5Y6 855 aa18.13■□□□□ 0.49
SDF4-201ENST00000263741 H3BM21 787 aa18.12■□□□□ 0.49
SDF4-201ENST00000263741 FOXD2O60548 495 aaPredicted RBP18.12■□□□□ 0.49
SDF4-201ENST00000263741 CD59P13987 128 aa18.12■□□□□ 0.49
SDF4-201ENST00000263741 GYS2P54840 703 aa18.12■□□□□ 0.49
SDF4-201ENST00000263741 HNRNPKP61978 463 aaKnown RBP eCLIP18.12■□□□□ 0.49
SDF4-201ENST00000263741 B4GALNT1Q00973 533 aa18.12■□□□□ 0.49
SDF4-201ENST00000263741 DBN1Q16643 649 aa18.12■□□□□ 0.49
SDF4-201ENST00000263741 DNAJC21Q5F1R6 531 aaKnown RBP18.12■□□□□ 0.49
SDF4-201ENST00000263741 KANSL1Q7Z3B3 1105 aa18.12■□□□□ 0.49
SDF4-201ENST00000263741 OTUD6BQ8N6M0 293 aa18.12■□□□□ 0.49
SDF4-201ENST00000263741 OR4L1Q8NH43 312 aa18.12■□□□□ 0.49
SDF4-201ENST00000263741 DGKBQ9Y6T7 804 aa18.12■□□□□ 0.49
SDF4-201ENST00000263741 FAM237BA0A1B0GVD1 139 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 OR2AG2A6NM03 316 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 AGAP14A8MT82 685 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 TNFRSF10CO14798 259 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 TNFP01375 233 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 AK4P27144 223 aaPredicted RBP18.11■□□□□ 0.49
SDF4-201ENST00000263741 CTSCP53634 463 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 TMEM115Q12893 351 aaPredicted RBP18.11■□□□□ 0.49
SDF4-201ENST00000263741 DEFB133Q30KQ1 61 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 CCDC25Q86WR0 208 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 GALNT13Q8IUC8 556 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 RASGEF1AQ8N9B8 481 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 DTX3LQ8TDB6 740 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 EBNA1BP2Q99848 306 aaKnown RBP18.11■□□□□ 0.49
SDF4-201ENST00000263741 C19orf43Q9BQ61 176 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 PLAC1Q9HBJ0 212 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 PCNX2A6NKB5 2137 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 TRBV5-4A0A0C4DH59 114 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 ZCWPW2A0A1B0GU75 182 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 AQP9O43315 295 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 CDK14O94921 469 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 CTSEP14091 401 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 ACRV1P26436 265 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 CRYMQ14894 314 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 PYCR3Q53H96 274 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 LDLRAP1Q5SW96 308 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 CAPN12Q6ZSI9 719 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 CHST15Q7LFX5 561 aaPredicted RBP18.11■□□□□ 0.49
SDF4-201ENST00000263741 TMEM135Q86UB9 458 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 TRAPPC5Q8IUR0 188 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 BEND7Q8N7W2 519 aaPredicted RBP18.11■□□□□ 0.49
SDF4-201ENST00000263741 SEC14L1Q92503 715 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 PEX13Q92968 403 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 OR2M4Q96R27 311 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 CATSPERZQ9NTU4 200 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 TEX264Q9Y6I9 313 aa18.11■□□□□ 0.49
SDF4-201ENST00000263741 BHMG1C9JSJ3 638 aaPredicted RBP18.1■□□□□ 0.49
SDF4-201ENST00000263741 SMAPO00193 183 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 NUAK1O60285 661 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 DFNA5O60443 496 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 ACP5P13686 325 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 PGAM1P18669 254 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 ARCN1P48444 511 aaKnown RBP18.1■□□□□ 0.49
SDF4-201ENST00000263741 BLKP51451 505 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 KIAA0930Q6ICG6 404 aaPredicted RBP18.1■□□□□ 0.49
SDF4-201ENST00000263741 ZNF547Q8IVP9 402 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 SFTPA2Q8IWL1 248 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 ZBED8Q8IZ13 594 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 EID2Q8N6I1 236 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 SETD7Q8WTS6 366 aaKnown RBP18.1■□□□□ 0.49
SDF4-201ENST00000263741 IFT81Q8WYA0 676 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 SGF29Q96ES7 293 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 SAYSD1Q9NPB0 183 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 ZDHHC18Q9NUE0 388 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 SPASTQ9UBP0 616 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 FAM8A1Q9UBU6 413 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 GRID2O43424 1007 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 SH3BP5O60239 455 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 PCDHGA12O60330 932 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 OR1I1O60431 355 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 USP1O94782 785 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 GIMD1P0DJR0 217 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 MSH3P20585 1137 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 PBLDP30039 288 aaPredicted RBP18.1■□□□□ 0.49
SDF4-201ENST00000263741 GPR33Q49SQ1 333 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 FASTKD1Q53R41 847 aaKnown RBP18.1■□□□□ 0.49
SDF4-201ENST00000263741 SLC30A9Q6PML9 568 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 CLDN19Q8N6F1 224 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms