RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 RASGEF1AQ8N9B8 481 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 SNX19Q92543 992 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 BIRC7Q96CA5 298 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 VPS35Q96QK1 796 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 SLC13A1Q9BZW2 595 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 CLPBQ9H078 707 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 OR2AG1Q9H205 316 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 VPS11Q9H270 941 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 CAAP1Q9H8G2 361 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 SARS2Q9NP81 518 aaKnown RBP9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 PCMTD2Q9NV79 361 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 ZNF358Q9NW07 568 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 SMOXQ9NWM0 555 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 VWA7Q9Y334 891 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 PRKAB1Q9Y478 270 aa9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 PCYT1BQ9Y5K3 369 aaPredicted RBP9.63□□□□□ -0.87
SNRNP40-201ENST00000263694 THADAQ6YHU6 1953 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 ANKRD12Q6UB98 2062 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 FAM86C2PA6NEL3 165 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 HMGB1P1B2RPK0 211 aaPredicted RBP9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 C10orf142B7Z368 130 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 PFDN6O15212 129 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 LATO43561 262 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 SGTAO43765 313 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 NDUFS2O75306 463 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 RHOBTB1O94844 696 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 TRIM16O95361 564 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 ASMTLO95671 621 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 C2P06681 752 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 ATP1B2P14415 290 aaPredicted RBP9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 CHRM3P20309 590 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 MSH3P20585 1137 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 FDXRP22570 491 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 CNTFP26441 200 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 MAOBP27338 520 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 OAS2P29728 719 aaKnown RBP9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 OXTRP30559 389 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 GYS2P54840 703 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 CDK3Q00526 305 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 CSTF1Q05048 431 aaKnown RBP9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 GPS2Q13227 327 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 SRSF5Q13243 272 aaKnown RBP9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 TPRG1LQ5T0D9 272 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 RNF187Q5TA31 235 aaPredicted RBP9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 LYPLAL1Q5VWZ2 237 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 PTRHD1Q6GMV3 140 aaKnown RBP9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 ADAMTSL4Q6UY14 1074 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 TIFABQ6ZNK6 161 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 RAPH1Q70E73 1250 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 ADGRG6Q86SQ4 1221 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 NLRP8Q86W28 1048 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 PLD6Q8N2A8 252 aaKnown RBP9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 SIDT2Q8NBJ9 832 aaKnown RBP9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 DDHD1Q8NEL9 900 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 DTX3LQ8TDB6 740 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 MTBPQ96DY7 904 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 DCUN1D1Q96GG9 259 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 HIC2Q96JB3 615 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 BMFQ96LC9 184 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 TTC1Q99614 292 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 GPR21Q99679 349 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 CCDC68Q9H2F9 335 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 KCNK9Q9NPC2 374 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 MED4Q9NPJ6 270 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 ATXN10Q9UBB4 475 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 FAM8A1Q9UBU6 413 aa9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 TSR3Q9UJK0 312 aaKnown RBP9.62□□□□□ -0.87
SNRNP40-201ENST00000263694 PLXND1Q9Y4D7 1925 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 A0A096LPK6 155 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 SCAMP1O15126 338 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 LAMTOR5O43504 91 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 GPR37L1O60883 481 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 CDK14O94921 469 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 FUCA1P04066 466 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 SLC35E2BP0CK96 405 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 TDGF1P13385 188 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 BRAFP15056 766 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 STMN1P16949 149 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 ZNF8P17098 575 aaPredicted RBP9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 TRIM23P36406 574 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 PPARGP37231 505 aaPredicted RBP9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 NSG1P42857 185 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 MAGEA9P43362 315 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 MAGEA12P43365 314 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 SERPINB8P50452 374 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 CSRP3P50461 194 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 CCR5P51681 352 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 SLC12A2P55011 1212 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 RAB10P61026 200 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 POU4F1Q01851 419 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 RPL6Q02878 288 aaKnown RBP9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 SLC18A2Q05940 514 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 DLG1Q12959 904 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 ITIH4Q14624 930 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 USP39Q53GS9 565 aaKnown RBP9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 LDLRAP1Q5SW96 308 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 FAM45BPQ6NSW5 357 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 C16orf46Q6P387 395 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 TMEM220Q6QAJ8 160 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms