RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 PAOXQ6QHF9 649 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 ANKRD23Q86SG2 305 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 UNC5BQ8IZJ1 945 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 EMID1Q96A84 441 aaPredicted RBP10.67□□□□□ -0.7
CD44-201ENST00000263398 RASSF1Q9NS23 344 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 VIRMAQ69YN4 1812 aaKnown RBP10.67□□□□□ -0.7
CD44-201ENST00000263398 ISM1B1AKI9 464 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 BTBD19C9JJ37 291 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 C9JVG2 144 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 PLK4O00444 970 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 PIP5K1BO14986 540 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 NDUFB5O43674 189 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 UGT1A9O60656 530 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 CAPN1P07384 714 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 PRPS2P11908 318 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 PTGER3P43115 390 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 SSR2P43308 183 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 AP1S1P61966 158 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 TXNRD3NBQ6F5E7 133 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 FAM92BQ6ZTR7 304 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 C11orf65Q8NCR3 313 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 FAM156AQ8NDB6 213 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 PIH1D2Q8WWB5 315 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 UPF1Q92900 1129 aaKnown RBP eCLIP10.67□□□□□ -0.7
CD44-201ENST00000263398 HMCESQ96FZ2 354 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 OXCT2Q9BYC2 517 aaPredicted RBP10.67□□□□□ -0.7
CD44-201ENST00000263398 UGT1A7Q9HAW7 530 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 UGT1A10Q9HAW8 530 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 UGT1A8Q9HAW9 530 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 NMUR1Q9HB89 426 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 GABRDO14764 452 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 KLF11O14901 512 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 GRM6O15303 877 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 HIST1H2ABP04908 130 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 GALK1P51570 392 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 PSMD4P55036 377 aaKnown RBP10.67□□□□□ -0.7
CD44-201ENST00000263398 HIST3H2AQ7L7L0 130 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 SLC34A3Q8N130 599 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 PARP8Q8N3A8 854 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 FIBCD1Q8N539 461 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 BEND7Q8N7W2 519 aaPredicted RBP10.67□□□□□ -0.7
CD44-201ENST00000263398 HIST1H2ACQ93077 130 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 PSMG2Q969U7 264 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 C3orf14Q9HBI5 128 aa10.67□□□□□ -0.7
CD44-201ENST00000263398 SYN3O14994 580 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 ELP6Q0PNE2 266 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 NAE1Q13564 534 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 PYDC2Q56P42 97 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 FBXO48Q5FWF7 155 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 NEK5Q6P3R8 708 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 CAMKK1Q8N5S9 505 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 MAB21L3Q8N8X9 362 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 GLB1L3Q8NCI6 653 aaPredicted RBP10.66□□□□□ -0.7
CD44-201ENST00000263398 PHC3Q8NDX5 983 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 PNPT1Q8TCS8 783 aaKnown RBP10.66□□□□□ -0.7
CD44-201ENST00000263398 OR8D1Q8WZ84 308 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 EBF3Q9H4W6 596 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 AASDHPPTQ9NRN7 309 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 PTTG2Q9NZH5 202 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 CFAP97Q9P2B7 532 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 SNX10Q9Y5X0 201 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 IRGMA1A4Y4 181 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 ATG13O75143 517 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 SLIT2O94813 1529 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 SLC1A2P43004 574 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 RGS1Q08116 209 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 GTF2H2Q13888 395 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 ZNF460Q14592 562 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 SOWAHAQ2M3V2 549 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 CCNYL2Q5T2Q4 361 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 GTF2H2CQ6P1K8 395 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 CXXC5Q7LFL8 322 aaKnown RBP10.66□□□□□ -0.7
CD44-201ENST00000263398 GALNT5Q7Z7M9 940 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 TMPRSS11BQ86T26 416 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 COMMD2Q86X83 199 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 CRYBG2Q8N1P7 616 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 PDPRQ8NCN5 879 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 CLEC4CQ8WTT0 213 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 EEF1AKMT1Q8WVE0 214 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 NODALQ96S42 347 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 HAPLN3Q96S86 360 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 AIF1LQ9BQI0 150 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 SLC27A6Q9Y2P4 619 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 TCRBV7S3A2A0A539 114 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 FPGTO14772 594 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 IDH3BO43837 385 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 OR10H2O60403 315 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 FADS2O95864 444 aaKnown RBP10.66□□□□□ -0.7
CD44-201ENST00000263398 CHRNGP07510 517 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 MYL9P24844 172 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 CCT3P49368 545 aaKnown RBP10.66□□□□□ -0.7
CD44-201ENST00000263398 HERC3Q15034 1050 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 SULT1C3Q6IMI6 304 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 ATG14Q6ZNE5 492 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 CPNE9Q8IYJ1 553 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 HBEGFQ99075 208 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 TRIM8Q9BZR9 551 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 EXD2Q9NVH0 621 aa10.66□□□□□ -0.7
CD44-201ENST00000263398 SUCOQ9UBS9 1254 aaKnown RBP10.66□□□□□ -0.7
CD44-201ENST00000263398 SEC14L3Q9UDX4 400 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms