RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 USP7Q93009 1102 aa13.46□□□□□ -0.25
TCF3-201ENST00000262965 RBM4BQ9BQ04 359 aaKnown RBP13.46□□□□□ -0.25
TCF3-201ENST00000262965 GPATCH1Q9BRR8 931 aaKnown RBP13.46□□□□□ -0.25
TCF3-201ENST00000262965 RBM4Q9BWF3 364 aaKnown RBP13.46□□□□□ -0.25
TCF3-201ENST00000262965 SLC25A51Q9H1U9 297 aa13.46□□□□□ -0.25
TCF3-201ENST00000262965 GIMAP2Q9UG22 337 aa13.46□□□□□ -0.25
TCF3-201ENST00000262965 EVLQ9UI08 416 aaPredicted RBP13.46□□□□□ -0.25
TCF3-201ENST00000262965 ZNF222Q9UK12 451 aa13.46□□□□□ -0.25
TCF3-201ENST00000262965 ANGPT4Q9Y264 503 aa13.46□□□□□ -0.25
TCF3-201ENST00000262965 PMF1-BGLAPU3KQ54 211 aa13.46□□□□□ -0.25
TCF3-201ENST00000262965 ALS2Q96Q42 1657 aa13.46□□□□□ -0.26
TCF3-201ENST00000262965 PGLSO95336 258 aa13.46□□□□□ -0.26
TCF3-201ENST00000262965 CCNCP24863 283 aa13.46□□□□□ -0.26
TCF3-201ENST00000262965 CASP9P55211 416 aa13.46□□□□□ -0.26
TCF3-201ENST00000262965 MERTKQ12866 999 aa13.46□□□□□ -0.26
TCF3-201ENST00000262965 TUSC3Q13454 348 aa13.46□□□□□ -0.26
TCF3-201ENST00000262965 KLHL12Q53G59 568 aa13.46□□□□□ -0.26
TCF3-201ENST00000262965 CCNYL2Q5T2Q4 361 aa13.46□□□□□ -0.26
TCF3-201ENST00000262965 PLET1Q6UQ28 207 aa13.46□□□□□ -0.26
TCF3-201ENST00000262965 ARRDC4Q8NCT1 418 aa13.46□□□□□ -0.26
TCF3-201ENST00000262965 KAT2AQ92830 837 aa13.46□□□□□ -0.26
TCF3-201ENST00000262965 HMCESQ96FZ2 354 aa13.46□□□□□ -0.26
TCF3-201ENST00000262965 FEM1CQ96JP0 617 aa13.46□□□□□ -0.26
TCF3-201ENST00000262965 FBXL18Q96ME1 805 aa13.46□□□□□ -0.26
TCF3-201ENST00000262965 SLC39A8Q9C0K1 460 aa13.46□□□□□ -0.26
TCF3-201ENST00000262965 SSR3Q9UNL2 185 aa13.46□□□□□ -0.26
TCF3-201ENST00000262965 SAMD4AQ9UPU9 718 aaKnown RBP13.46□□□□□ -0.26
TCF3-201ENST00000262965 DLX3O60479 287 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 CAPGP40121 348 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 TGM3Q08188 693 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 KCNJ11Q14654 390 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 SYT16Q17RD7 645 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 FAM131AQ6UXB0 335 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 FAM210AQ96ND0 272 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 PIGVQ9NUD9 493 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 OXSMQ9NWU1 459 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 ZNF214Q9UL59 606 aaPredicted RBP13.45□□□□□ -0.26
TCF3-201ENST00000262965 FZD10Q9ULW2 581 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 TELO2Q9Y4R8 837 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 PLIN4Q96Q06 1357 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 KDM3BQ7LBC6 1761 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 LSM1O15116 133 aaKnown RBP13.45□□□□□ -0.26
TCF3-201ENST00000262965 MATN3O15232 486 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 SGTAO43765 313 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 TYROBPO43914 113 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 NUDT14O95848 222 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 IFNGR2P38484 337 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 CPTPQ5TA50 214 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 NIPA2Q8N8Q9 360 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 LEMD2Q8NC56 503 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 C7orf43Q8WVR3 580 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 BTN2A3PQ96KV6 586 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 EBPLQ9BY08 206 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 INTS7Q9NVH2 962 aaKnown RBP13.45□□□□□ -0.26
TCF3-201ENST00000262965 FKBPLQ9UIM3 349 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 TESMINQ9Y4I5 508 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 SCN11AQ9UI33 1791 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 RPLP2P05387 115 aaKnown RBP13.45□□□□□ -0.26
TCF3-201ENST00000262965 CYP2A6P11509 494 aaPredicted RBP13.45□□□□□ -0.26
TCF3-201ENST00000262965 UGT2B15P54855 530 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 CCL23P55773 120 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 SLC25A11Q02978 314 aaKnown RBP13.45□□□□□ -0.26
TCF3-201ENST00000262965 RAET1GQ6H3X3 334 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 TRIM40Q6P9F5 258 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 OR13C4Q8NGS5 318 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 ATL1Q8WXF7 558 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 HNRNPABQ99729 332 aaKnown RBP13.45□□□□□ -0.26
TCF3-201ENST00000262965 COPS4Q9BT78 406 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 RSPH9Q9H1X1 276 aaPredicted RBP13.45□□□□□ -0.26
TCF3-201ENST00000262965 FBRSL1Q9HCM7 1045 aaKnown RBP13.45□□□□□ -0.26
TCF3-201ENST00000262965 IGSF9Q9P2J2 1179 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 PTPRJQ12913 1337 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 SNED1Q8TER0 1413 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 FAM240BA0A1B0GVZ2 78 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 FAM159BA6NKW6 160 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 SNX4O95219 450 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 SPATA31D3P0C874 917 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 PRG2P13727 222 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 ITGA2P17301 1181 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 ECT2LQ008S8 904 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 DUSP28Q4G0W2 176 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 NCBP2-AS2Q69YL0 99 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 GPR153Q6NV75 609 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 SPATA31D4Q6ZUB0 917 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 CCDC80Q76M96 950 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 RNF44Q7L0R7 432 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 OR10Q1Q8NGQ4 319 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 PPTC7Q8NI37 304 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 TOP1MTQ969P6 601 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 MYOCQ99972 504 aa13.45□□□□□ -0.26
TCF3-201ENST00000262965 SF3B1O75533 1304 aaKnown RBP eCLIP13.45□□□□□ -0.266e-7■■■■■ 107.9
TCF3-201ENST00000262965 AIREO43918 545 aa13.44□□□□□ -0.26
TCF3-201ENST00000262965 POLR2EP19388 210 aaKnown RBP13.44□□□□□ -0.26
TCF3-201ENST00000262965 SLC7A1P30825 629 aa13.44□□□□□ -0.26
TCF3-201ENST00000262965 SLC18A2Q05940 514 aa13.44□□□□□ -0.26
TCF3-201ENST00000262965 MTAPQ13126 283 aa13.44□□□□□ -0.26
TCF3-201ENST00000262965 DLK2Q6UY11 383 aa13.44□□□□□ -0.26
TCF3-201ENST00000262965 LMO3Q8TAP4 145 aa13.44□□□□□ -0.26
TCF3-201ENST00000262965 XAGE5Q8WWM1 108 aa13.44□□□□□ -0.26
TCF3-201ENST00000262965 DDX1Q92499 740 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms