RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 MTMR11A4FU01 709 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 SEPT4O43236 478 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 HOXB8P17481 243 aaPredicted RBP16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 MC4RP32245 332 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 FLT3LGP49771 235 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 GALK1P51570 392 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 OR4D2P58180 307 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 ZRANB3Q5FWF4 1079 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 XKR7Q5GH72 579 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 MFSD14CQ5VZR4 134 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 AFTPHQ6ULP2 937 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 LINGO4Q6UY18 593 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 SLC24A5Q71RS6 500 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 ERI1Q8IV48 349 aaKnown RBP16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 DRAXINQ8NBI3 349 aaPredicted RBP16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 RNF217Q8TC41 542 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 PROKR1Q8TCW9 393 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 VPS50Q96JG6 964 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 C9orf16Q9BUW7 83 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 OLA1Q9NTK5 396 aaKnown RBP16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 GALNT8Q9NY28 637 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 UBA2Q9UBT2 640 aaPredicted RBP16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 CBX4O00257 560 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 E2F3O00716 465 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 INSIG1O15503 277 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 CLOCKO15516 846 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 SYNCRIPO60506 623 aaKnown RBP16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 GJB5O95377 273 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 BMP10O95393 424 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 UROSP10746 265 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 BMP1P13497 986 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 PAX3P23760 479 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 HRH2P25021 359 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 RFC2P35250 354 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 HTR6P50406 440 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 EMP3P54852 163 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 ERVPABLB-1P60509 514 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 TUBA4AP68366 448 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 C6orf136Q5SQH8 315 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 OTUD3Q5T2D3 398 aaPredicted RBP16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 IRAK1BP1Q5VVH5 260 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 OGFOD2Q6N063 350 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 LETMD1Q6P1Q0 360 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 Q6ZSR9 355 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 SPATA19Q7Z5L4 167 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 GPR141Q7Z602 305 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 DENND1CQ8IV53 801 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 TMEM199Q8N511 208 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 PPM1MQ96MI6 270 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 PSKH2Q96QS6 385 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 TIMMDC1Q9NPL8 285 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 SEPT3Q9UH03 358 aa16.2■□□□□ 0.18
TM9SF1-201ENST00000261789 C2orf81A6NN90 581 aa16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 SYCE1LA8MT33 242 aa16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 KATNA1O75449 491 aa16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 RASAL1O95294 804 aa16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 CKBP12277 381 aa16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 PKMP14618 531 aaKnown RBP16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 VARSP26640 1264 aaKnown RBP16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 MAGEA11P43364 429 aa16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 SELPLGQ14242 412 aa16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 C16orf59Q7L2K0 433 aa16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 GPSM1Q86YR5 675 aa16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 CD200R1Q8TD46 325 aa16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 BIRC7Q96CA5 298 aa16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 ISOC1Q96CN7 298 aa16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 RNF145Q96MT1 663 aa16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 SCUBE2Q9NQ36 999 aa16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 TRMT6Q9UJA5 497 aaKnown RBP16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 FADS3Q9Y5Q0 445 aa16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 EEDO75530 441 aaKnown RBP16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 CHEK2O96017 543 aa16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 PCNAP12004 261 aa16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 MTPNP58546 118 aa16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 TAF1AQ15573 450 aaPredicted RBP16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 ZIK1Q3SY52 487 aaPredicted RBP16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 TMEM214Q6NUQ4 689 aaKnown RBP16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 GPRIN3Q6ZVF9 776 aa16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 SPRED1Q7Z699 444 aa16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 PACRGLQ8N7B6 248 aa16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 TDRD1Q9BXT4 1180 aaKnown RBP16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 ANAPC2Q9UJX6 822 aa16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 MAGED1Q9Y5V3 778 aaPredicted RBP16.19■□□□□ 0.18
TM9SF1-201ENST00000261789 A0A087WXM4 84 aa16.18■□□□□ 0.18
TM9SF1-201ENST00000261789 GIPC1O14908 333 aa16.18■□□□□ 0.18
TM9SF1-201ENST00000261789 VPS4BO75351 444 aa16.18■□□□□ 0.18
TM9SF1-201ENST00000261789 VPS26AO75436 327 aa16.18■□□□□ 0.18
TM9SF1-201ENST00000261789 GPIP06744 558 aa16.18■□□□□ 0.18
TM9SF1-201ENST00000261789 DGKQP52824 942 aa16.18■□□□□ 0.18
TM9SF1-201ENST00000261789 OXCT1P55809 520 aa16.18■□□□□ 0.18
TM9SF1-201ENST00000261789 IL2P60568 153 aa16.18■□□□□ 0.18
TM9SF1-201ENST00000261789 PMS2P3Q13401 168 aa16.18■□□□□ 0.18
TM9SF1-201ENST00000261789 BTG3Q14201 252 aaPredicted RBP16.18■□□□□ 0.18
TM9SF1-201ENST00000261789 CYBRD1Q53TN4 286 aa16.18■□□□□ 0.18
TM9SF1-201ENST00000261789 TMTC4Q5T4D3 741 aa16.18■□□□□ 0.18
TM9SF1-201ENST00000261789 ALG1LQ6GMV1 187 aa16.18■□□□□ 0.18
TM9SF1-201ENST00000261789 SFRP1Q8N474 314 aa16.18■□□□□ 0.18
TM9SF1-201ENST00000261789 C12orf43Q96C57 262 aaKnown RBP16.18■□□□□ 0.18
TM9SF1-201ENST00000261789 NACA2Q9H009 215 aa16.18■□□□□ 0.18
TM9SF1-201ENST00000261789 GKN1Q9NS71 199 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms