RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 CSE1LP55060 971 aaKnown RBP15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 ADARP55265 1226 aaKnown RBP15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 DMTNQ08495 405 aa15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 LPAL2Q16609 132 aa15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 CTSL3PQ5NE16 218 aa15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 MFSD2AQ8NA29 543 aa15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 FAM174AQ8TBP5 190 aa15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 HEXDCQ8WVB3 486 aa15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 SGF29Q96ES7 293 aa15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 KLHDC7BQ96G42 594 aa15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 RBBP8Q99708 897 aa15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 RHOJQ9H4E5 214 aa15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 PILRBQ9UKJ0 227 aa15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 VPS9D1Q9Y2B5 631 aa15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 SLC17A4Q9Y2C5 497 aa15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 PCYT1BQ9Y5K3 369 aaPredicted RBP15.61■□□□□ 0.09
CCDC90B-201ENST00000260054 SMIM23A6NLE4 172 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 OR2AG2A6NM03 316 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 CFAP99D6REC4 459 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 VEGFDO43915 354 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 TCEA3O75764 348 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 FUCA1P04066 466 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 CEACAM5P06731 702 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 INHBAP08476 426 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 RALBP11234 206 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 RPS3P23396 243 aaKnown RBP eCLIP15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 THOP1P52888 689 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 LIMK2P53671 638 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 IFFO1Q0D2I5 559 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 GRTP1Q5TC63 336 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 IQCHQ86VS3 1027 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 ACVR1CQ8NER5 493 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 ZBTB9Q96C00 473 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 VPS39Q96JC1 886 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 NDNQ99608 321 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 ZCCHC2Q9C0B9 1178 aaKnown RBP15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 CLPBQ9H078 707 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 FGF22Q9HCT0 170 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 CTNNAL1Q9UBT7 734 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 SLC24A2Q9UI40 661 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 ZNF180Q9UJW8 692 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 PNMA8BQ9ULN7 279 aaPredicted RBP15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 HMX2A2RU54 273 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 DNAJC6O75061 913 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 HTR1BP28222 390 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 CSNK1EP49674 416 aaKnown RBP15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 ZNF844Q08AG5 666 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 RBM20Q5T481 1227 aaKnown RBP15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 ZC3H14Q6PJT7 736 aaKnown RBP15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 ADGRD1Q6QNK2 874 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 ENPP7Q6UWV6 458 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 MACC1Q6ZN28 852 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 OR56A4Q8NGH8 313 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 PIGKQ92643 395 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 WDR92Q96MX6 357 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 MRPL40Q9NQ50 206 aaKnown RBP15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 ZNF446Q9NWS9 450 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 EURLQ9NYK6 297 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 MTO1Q9Y2Z2 717 aaKnown RBP15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 IKBKGQ9Y6K9 419 aa15.6■□□□□ 0.09
CCDC90B-201ENST00000260054 MYO15AQ9UKN7 3530 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 DMDP11532 3685 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 SPTY2D1-AS1A0A0U1RR47 76 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 IQCF5A8MTL0 148 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 TLR4O00206 839 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 CHUKO15111 745 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 VILLO15195 856 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 NUAK1O60285 661 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 ESR1P03372 595 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 IVLP07476 585 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 PKMP14618 531 aaKnown RBP15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 KELP23276 732 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 SPRP35270 261 aaPredicted RBP15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 AFF3P51826 1226 aaKnown RBP15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 OVGP1Q12889 678 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 BMPR2Q13873 1038 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 FZD2Q14332 565 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 PEAR1Q5VY43 1037 aaPredicted RBP15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 TMEM220Q6QAJ8 160 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 HDXQ7Z353 690 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 SYT12Q8IV01 421 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 ZNF547Q8IVP9 402 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 BEND7Q8N7W2 519 aaPredicted RBP15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 GPATCH11Q8N954 259 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 LKAAEAR1Q8TD35 194 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 OR1E3Q8WZA6 343 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 PDXPQ96GD0 296 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 PRRX2Q99811 253 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 AARSD1Q9BTE6 412 aaKnown RBP15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 TMEM109Q9BVC6 243 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 PPCSQ9HAB8 311 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 PSMC3IPQ9P2W1 217 aaPredicted RBP15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 GNPTGQ9UJJ9 305 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 MED16Q9Y2X0 877 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 PRKAB1Q9Y478 270 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 PCDHB1Q9Y5F3 818 aa15.59■□□□□ 0.09
CCDC90B-201ENST00000260054 KNL1Q8NG31 2342 aa15.58■□□□□ 0.09
CCDC90B-201ENST00000260054 A0A1B0GTW7 788 aa15.58■□□□□ 0.08
CCDC90B-201ENST00000260054 FAM95CA0A1B0GW59 222 aa15.58■□□□□ 0.08
CCDC90B-201ENST00000260054 PRSS38A1L453 326 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms