RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 ZBED5Q49AG3 693 aa15.1■□□□□ 0.01
DDX56-201ENST00000258772 PSAPL1Q6NUJ1 521 aa15.1■□□□□ 0.01
DDX56-201ENST00000258772 GPR141Q7Z602 305 aa15.1■□□□□ 0.01
DDX56-201ENST00000258772 TBC1D21Q8IYX1 336 aa15.1■□□□□ 0.01
DDX56-201ENST00000258772 SIDT2Q8NBJ9 832 aaKnown RBP15.1■□□□□ 0.01
DDX56-201ENST00000258772 EEF1AKMT1Q8WVE0 214 aa15.1■□□□□ 0.01
DDX56-201ENST00000258772 CYGBQ8WWM9 190 aa15.1■□□□□ 0.01
DDX56-201ENST00000258772 SEPT8Q92599 483 aa15.1■□□□□ 0.01
DDX56-201ENST00000258772 SEPT5Q99719 369 aaPredicted RBP15.1■□□□□ 0.01
DDX56-201ENST00000258772 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.1■□□□□ 0.019e-6■■□□□ 13.2
DDX56-201ENST00000258772 PFDN4Q9NQP4 134 aa15.1■□□□□ 0.01
DDX56-201ENST00000258772 ZIM2Q9NZV7 527 aa15.1■□□□□ 0.01
DDX56-201ENST00000258772 UBA2Q9UBT2 640 aaPredicted RBP15.1■□□□□ 0.01
DDX56-201ENST00000258772 ANAPC2Q9UJX6 822 aa15.1■□□□□ 0.01
DDX56-201ENST00000258772 OR6C75A6NL08 312 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 GIPC1O14908 333 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 CLOCKO15516 846 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 NIPSNAP2O75323 286 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 CLIC3O95833 236 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 ZDHHC11BP0C7U3 371 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 CR2P20023 1033 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 LPOP22079 712 aaPredicted RBP15.09■□□□□ 0.01
DDX56-201ENST00000258772 KPNA1P52294 538 aaPredicted RBP15.09■□□□□ 0.01
DDX56-201ENST00000258772 EMP3P54852 163 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 MTA1Q13330 715 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 AASDHQ4L235 1098 aaPredicted RBP15.09■□□□□ 0.01
DDX56-201ENST00000258772 C6orf136Q5SQH8 315 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 GPRIN3Q6ZVF9 776 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 PROKR1Q8TCW9 393 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 LINC01599Q8WXQ3 324 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 FBXL20Q96IG2 436 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 PREBQ9HCU5 417 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 INTS7Q9NVH2 962 aaKnown RBP15.09■□□□□ 0.01
DDX56-201ENST00000258772 TRMT6Q9UJA5 497 aaKnown RBP15.09■□□□□ 0.01
DDX56-201ENST00000258772 VPS9D1Q9Y2B5 631 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 ASB1Q9Y576 335 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 FADS3Q9Y5Q0 445 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 HEMK1Q9Y5R4 338 aaPredicted RBP15.09■□□□□ 0.01
DDX56-201ENST00000258772 ZFP37Q9Y6Q3 630 aaPredicted RBP15.09■□□□□ 0.01
DDX56-201ENST00000258772 MTMR11A4FU01 709 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 E2F3O00716 465 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 ACSL4O60488 711 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 OR4F21O95013 312 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 VNN2O95498 520 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 CD9P21926 228 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 IL2P60568 153 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 FAM189BP81408 668 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 TIGD2Q4W5G0 525 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 CTSL3PQ5NE16 218 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 CCSAPQ6IQ19 270 aaPredicted RBP15.09■□□□□ 0.01
DDX56-201ENST00000258772 Q6ZSR9 355 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 GPSM1Q86YR5 675 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 DHRSXQ8N5I4 330 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 SPATA17Q96L03 361 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 TDRD1Q9BXT4 1180 aaKnown RBP15.09■□□□□ 0.01
DDX56-201ENST00000258772 GPR62Q9BZJ7 368 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 RPF2Q9H7B2 306 aaKnown RBP15.09■□□□□ 0.01
DDX56-201ENST00000258772 CD274Q9NZQ7 290 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 SUN2Q9UH99 717 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 GABRQQ9UN88 632 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 USP22Q9UPT9 525 aa15.09■□□□□ 0.01
DDX56-201ENST00000258772 FAM234BA2RU67 622 aa15.08■□□□□ 0
DDX56-201ENST00000258772 KDELR3O43731 214 aa15.08■□□□□ 0
DDX56-201ENST00000258772 SYNCRIPO60506 623 aaKnown RBP15.08■□□□□ 0
DDX56-201ENST00000258772 HTR1EP28566 365 aa15.08■□□□□ 0
DDX56-201ENST00000258772 MC4RP32245 332 aa15.08■□□□□ 0
DDX56-201ENST00000258772 TTPAP49638 278 aa15.08■□□□□ 0
DDX56-201ENST00000258772 OXCT1P55809 520 aa15.08■□□□□ 0
DDX56-201ENST00000258772 EMX2Q04743 252 aa15.08■□□□□ 0
DDX56-201ENST00000258772 CYBRD1Q53TN4 286 aa15.08■□□□□ 0
DDX56-201ENST00000258772 CLVS1Q8IUQ0 354 aaPredicted RBP15.08■□□□□ 0
DDX56-201ENST00000258772 CDYL2Q8N8U2 506 aa15.08■□□□□ 0
DDX56-201ENST00000258772 DCBLD1Q8N8Z6 715 aa15.08■□□□□ 0
DDX56-201ENST00000258772 FNDC5Q8NAU1 212 aa15.08■□□□□ 0
DDX56-201ENST00000258772 CD200R1Q8TD46 325 aa15.08■□□□□ 0
DDX56-201ENST00000258772 BIRC7Q96CA5 298 aa15.08■□□□□ 0
DDX56-201ENST00000258772 SCUBE2Q9NQ36 999 aa15.08■□□□□ 0
DDX56-201ENST00000258772 RIC8BQ9NVN3 520 aa15.08■□□□□ 0
DDX56-201ENST00000258772 SMPD3Q9NY59 655 aaPredicted RBP15.08■□□□□ 0
DDX56-201ENST00000258772 EIF2B4Q9UI10 523 aaKnown RBP15.08■□□□□ 0
DDX56-201ENST00000258772 FKBPLQ9UIM3 349 aa15.08■□□□□ 0
DDX56-201ENST00000258772 PCDHGC4Q9Y5F7 938 aa15.08■□□□□ 0
DDX56-201ENST00000258772 H3BNC9 293 aa15.08■□□□□ 0
DDX56-201ENST00000258772 SNAP91O60641 907 aa15.08■□□□□ 0
DDX56-201ENST00000258772 LDLRP01130 860 aa15.08■□□□□ 0
DDX56-201ENST00000258772 NPPAP01160 153 aa15.08■□□□□ 0
DDX56-201ENST00000258772 ENO2P09104 434 aaPredicted RBP15.08■□□□□ 0
DDX56-201ENST00000258772 CAPGP40121 348 aa15.08■□□□□ 0
DDX56-201ENST00000258772 RPS9P46781 194 aaKnown RBP15.08■□□□□ 0
DDX56-201ENST00000258772 CDH4P55283 916 aa15.08■□□□□ 0
DDX56-201ENST00000258772 RPS24P62847 133 aaKnown RBP15.08■□□□□ 0
DDX56-201ENST00000258772 FXNQ16595 210 aa15.08■□□□□ 0
DDX56-201ENST00000258772 ABRAXAS1Q6UWZ7 409 aa15.08■□□□□ 0
DDX56-201ENST00000258772 RSPO2Q6UXX9 243 aaPredicted RBP15.08■□□□□ 0
DDX56-201ENST00000258772 RNF19BQ6ZMZ0 732 aa15.08■□□□□ 0
DDX56-201ENST00000258772 PATL1Q86TB9 770 aaKnown RBP15.08■□□□□ 0
DDX56-201ENST00000258772 HID1Q8IV36 788 aa15.08■□□□□ 0
DDX56-201ENST00000258772 LPCAT1Q8NF37 534 aa15.08■□□□□ 0
DDX56-201ENST00000258772 OR52B6Q8NGF0 335 aa15.08■□□□□ 0
DDX56-201ENST00000258772 MAGEE2Q8TD90 523 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms