RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 OR2T11Q8NH01 316 aa13.38□□□□□ -0.27
VHL-201ENST00000256474 ZC3H15Q8WU90 426 aaKnown RBP13.38□□□□□ -0.27
VHL-201ENST00000256474 BTN2A3PQ96KV6 586 aa13.38□□□□□ -0.27
VHL-201ENST00000256474 ARMC7Q9H6L4 198 aa13.38□□□□□ -0.27
VHL-201ENST00000256474 PHF24Q9UPV7 400 aa13.38□□□□□ -0.27
VHL-201ENST00000256474 CACNG3O60359 315 aa13.38□□□□□ -0.27
VHL-201ENST00000256474 LRATO95237 230 aa13.38□□□□□ -0.27
VHL-201ENST00000256474 ALPIP09923 528 aa13.38□□□□□ -0.27
VHL-201ENST00000256474 FDXRP22570 491 aa13.38□□□□□ -0.27
VHL-201ENST00000256474 TXNL4AP83876 142 aaKnown RBP13.38□□□□□ -0.27
VHL-201ENST00000256474 TBC1D25Q3MII6 688 aa13.38□□□□□ -0.27
VHL-201ENST00000256474 ATXN7L2Q5T6C5 722 aaPredicted RBP13.38□□□□□ -0.27
VHL-201ENST00000256474 ARMC12Q5T9G4 340 aa13.38□□□□□ -0.27
VHL-201ENST00000256474 MANEALQ5VSG8 457 aa13.38□□□□□ -0.27
VHL-201ENST00000256474 PRSS55Q6UWB4 352 aaPredicted RBP13.38□□□□□ -0.27
VHL-201ENST00000256474 GCNT7Q6ZNI0 430 aa13.38□□□□□ -0.27
VHL-201ENST00000256474 UTS2BQ765I0 119 aa13.38□□□□□ -0.27
VHL-201ENST00000256474 OR10A6Q8NH74 314 aa13.38□□□□□ -0.27
VHL-201ENST00000256474 BRSK1Q8TDC3 778 aa13.38□□□□□ -0.27
VHL-201ENST00000256474 CCDC97Q96F63 343 aaPredicted RBP13.38□□□□□ -0.27
VHL-201ENST00000256474 SLC2A11Q9BYW1 496 aa13.38□□□□□ -0.27
VHL-201ENST00000256474 DNAAF2Q9NVR5 837 aaKnown RBP13.38□□□□□ -0.27
VHL-201ENST00000256474 SMPD3Q9NY59 655 aaPredicted RBP13.38□□□□□ -0.27
VHL-201ENST00000256474 UBA2Q9UBT2 640 aaPredicted RBP13.38□□□□□ -0.27
VHL-201ENST00000256474 KLQ9UEF7 1012 aa13.38□□□□□ -0.27
VHL-201ENST00000256474 ZNF189O75820 626 aaPredicted RBP13.37□□□□□ -0.27
VHL-201ENST00000256474 CD247P20963 164 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 CDK9P50750 372 aaKnown RBP13.37□□□□□ -0.27
VHL-201ENST00000256474 IL2P60568 153 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 ADRM1Q16186 407 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 AARS2Q5JTZ9 985 aaKnown RBP13.37□□□□□ -0.27
VHL-201ENST00000256474 ABRAXAS1Q6UWZ7 409 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 SAPCD2Q86UD0 394 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 KIAA2013Q8IYS2 634 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 PHACTR4Q8IZ21 702 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 TRPV1Q8NER1 839 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 TRPV3Q8NET8 790 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 ROPN1LQ96C74 230 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 FBXO44Q9H4M3 255 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 VPS4AQ9UN37 437 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 PKP3Q9Y446 797 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 IGLV3-25P01717 112 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 RHOCP08134 193 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 TACR2P21452 398 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 POLD2P49005 469 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 CLCN2P51788 898 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 SERINC3Q13530 473 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 GTF2H3Q13889 308 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 RAB39AQ14964 217 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 AP5B1Q2VPB7 878 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 SMYD5Q6GMV2 418 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 GALNT5Q7Z7M9 940 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 UMODL1-AS1Q8N2C9 162 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 CARNMT1Q8N4J0 409 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 FAM162AQ96A26 154 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 ULK4Q96C45 1275 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 ATOH8Q96SQ7 321 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 CRISPLD1Q9H336 500 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 UTS2RQ9UKP6 389 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 SLC30A1Q9Y6M5 507 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 MYO1GB0I1T2 1018 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 HS6ST1O60243 411 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 FGF1P05230 155 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 SUSD3Q96L08 255 aa13.37□□□□□ -0.27
VHL-201ENST00000256474 TLR8Q9NR97 1041 aaKnown RBP13.37□□□□□ -0.27
VHL-201ENST00000256474 GJB5O95377 273 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 S100BP04271 92 aaPredicted RBP13.36□□□□□ -0.27
VHL-201ENST00000256474 IL12AP29459 219 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 CHRNB3Q05901 458 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 TSTA3Q13630 321 aaPredicted RBP13.36□□□□□ -0.27
VHL-201ENST00000256474 DGCR6Q14129 220 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 PABPC1LQ4VXU2 614 aaKnown RBP13.36□□□□□ -0.27
VHL-201ENST00000256474 BLOC1S3Q6QNY0 202 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 CD300LGQ6UXG3 332 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 MBOAT1Q6ZNC8 495 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 ERI1Q8IV48 349 aaKnown RBP13.36□□□□□ -0.27
VHL-201ENST00000256474 SLC22A15Q8IZD6 547 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 FAM86B1Q8N7N1 296 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 MDGA1Q8NFP4 955 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 OR56A4Q8NGH8 313 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 FUBP1Q96AE4 644 aaKnown RBP13.36□□□□□ -0.27
VHL-201ENST00000256474 PPP1R2P1Q96PQ5 205 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 ANKRD60Q9BZ19 345 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 GPR62Q9BZJ7 368 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 ACTR3BQ9P1U1 418 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 ANKRD33BA6NCL7 494 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 KRT87PA6NCN2 255 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 NDST3O95803 873 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 PKMP14618 531 aaKnown RBP13.36□□□□□ -0.27
VHL-201ENST00000256474 HLA-DPA1P20036 260 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 UGT1A1P22309 533 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 UGT1A4P22310 534 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 VARSP26640 1264 aaKnown RBP13.36□□□□□ -0.27
VHL-201ENST00000256474 UGT1A3P35503 534 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 UGT1A5P35504 534 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 MTHFRP42898 656 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 CSRP3P50461 194 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 CTBSQ01459 385 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 PRKG2Q13237 762 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 GTDC1Q4AE62 458 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms