RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 PRR19A6NJB7 356 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 FAM159BA6NKW6 160 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 GOLGA8KD6RF30 607 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 GOLGA8TH3BQL2 631 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 PFDN6O15212 129 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 CDK14O94921 469 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 RASGRP1O95267 797 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 CER1O95813 267 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 S1PR4O95977 384 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 GSTM1P09488 218 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 ZNF883P0CG24 379 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 ERVK-10P10266 1014 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 ZNF7P17097 686 aaPredicted RBP13.93□□□□□ -0.18
VPS25-201ENST00000253794 ZNF8P17098 575 aaPredicted RBP13.93□□□□□ -0.18
VPS25-201ENST00000253794 ENGP17813 658 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 MSH3P20585 1137 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 STX2P32856 288 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 SLC1A2P43004 574 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 LEPRP48357 1165 aaKnown RBP13.93□□□□□ -0.18
VPS25-201ENST00000253794 POLD2P49005 469 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 PRLHRP49683 370 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 GSTM4Q03013 218 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 PPARDQ03181 441 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 ILF2Q12905 390 aaKnown RBP13.93□□□□□ -0.18
VPS25-201ENST00000253794 NAB1Q13506 487 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 PYCR3Q53H96 274 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 KCTD16Q68DU8 428 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 ZNF470Q6ECI4 717 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 EMBQ6PCB8 327 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 ENPP7Q6UWV6 458 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 C11orf96Q7Z7L8 435 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 ZNF547Q8IVP9 402 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 GSPT2Q8IYD1 628 aaKnown RBP13.93□□□□□ -0.18
VPS25-201ENST00000253794 PHACTR4Q8IZ21 702 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 SDR16C5Q8N3Y7 309 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 RASGEF1AQ8N9B8 481 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 GDAP1Q8TB36 358 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 CCDC97Q96F63 343 aaPredicted RBP13.93□□□□□ -0.18
VPS25-201ENST00000253794 MCMBPQ9BTE3 642 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 OR2AG1Q9H205 316 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 P2RY12Q9H244 342 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 PARD6AQ9NPB6 346 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 TRNAU1APQ9NX07 287 aaKnown RBP13.93□□□□□ -0.18
VPS25-201ENST00000253794 NSMCE4AQ9NXX6 385 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 IL1RAPL1Q9NZN1 696 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 KLF15Q9UIH9 416 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 FBXO5Q9UKT4 447 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 SUFUQ9UMX1 484 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 TMEM98Q9Y2Y6 226 aa13.93□□□□□ -0.18
VPS25-201ENST00000253794 ZFHX2Q9C0A1 2572 aaPredicted RBP13.93□□□□□ -0.18
VPS25-201ENST00000253794 PRMT5O14744 637 aaPredicted RBP13.92□□□□□ -0.18
VPS25-201ENST00000253794 KCNJ13O60928 360 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 MTX2O75431 263 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 ASMTLO95671 621 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 ATP1B2P14415 290 aaPredicted RBP13.92□□□□□ -0.18
VPS25-201ENST00000253794 AKT1P31749 480 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 PHBP35232 272 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 ARRB1P49407 418 aaPredicted RBP13.92□□□□□ -0.18
VPS25-201ENST00000253794 CLCNKAP51800 687 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 CTSCP53634 463 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 PMS2P54278 862 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 HNRNPKP61978 463 aaKnown RBP eCLIP13.92□□□□□ -0.18
VPS25-201ENST00000253794 GTF2H3Q13889 308 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 LRP8Q14114 963 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 SHBQ15464 509 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 HLA-BQ31612 363 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 ZNF648Q5T619 568 aaPredicted RBP13.92□□□□□ -0.18
VPS25-201ENST00000253794 TCEAL6Q6IPX3 200 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 ASCL5Q7RTU5 278 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 KANSL1Q7Z3B3 1105 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 LRRTM4Q86VH4 590 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 DENND6AQ8IWF6 608 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 TCEAL3Q969E4 200 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 CAVIN3Q969G5 261 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 TSACCQ96A04 125 aaPredicted RBP13.92□□□□□ -0.18
VPS25-201ENST00000253794 DCUN1D1Q96GG9 259 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 BIRC8Q96P09 236 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 PHOX2BQ99453 314 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 TIMM29Q9BSF4 260 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 BOCQ9BWV1 1114 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 SMOC1Q9H4F8 434 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 ACSS3Q9H6R3 686 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 ARFGAP3Q9NP61 516 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 MRPL40Q9NQ50 206 aaKnown RBP13.92□□□□□ -0.18
VPS25-201ENST00000253794 IARS2Q9NSE4 1012 aaKnown RBP13.92□□□□□ -0.18
VPS25-201ENST00000253794 DNAAF2Q9NVR5 837 aaKnown RBP13.92□□□□□ -0.18
VPS25-201ENST00000253794 ZFATQ9P243 1243 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 PCYT1BQ9Y5K3 369 aaPredicted RBP13.92□□□□□ -0.18
VPS25-201ENST00000253794 KNL1Q8NG31 2342 aa13.92□□□□□ -0.18
VPS25-201ENST00000253794 EP300Q09472 2414 aaPredicted RBP13.91□□□□□ -0.18
VPS25-201ENST00000253794 H3BM21 787 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 KMOO15229 486 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 RIPK2O43353 540 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 GRID2O43424 1007 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 PCDHGA12O60330 932 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 OR1I1O60431 355 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 NDUFS3O75489 264 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 TNFP01375 233 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 ESR1P03372 595 aa13.91□□□□□ -0.18
VPS25-201ENST00000253794 JUNDP17535 347 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms