RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 FBXL20Q96IG2 436 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 BTN2A3PQ96KV6 586 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 C17orf80Q9BSJ5 609 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 NOL6Q9H6R4 1146 aaKnown RBP16.84■□□□□ 0.29
FOXA1-201ENST00000250448 CATSPERBQ9H7T0 1116 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 CXorf21Q9HAI6 301 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 CMTM6Q9NX76 183 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 ACTR3BQ9P1U1 418 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 DNMT3LQ9UJW3 386 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 GJA1P17302 382 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 OXTRP30559 389 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 CCT8P50990 548 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 VEPH1Q14D04 833 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 VPS26BQ4G0F5 336 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 SPRED1Q7Z699 444 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 ZNF354CQ86Y25 554 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 CLYBLQ8N0X4 340 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 RTL3Q8N8U3 475 aaKnown RBP16.84■□□□□ 0.29
FOXA1-201ENST00000250448 PNPLA1Q8N8W4 532 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 ZNF420Q8TAQ5 688 aaPredicted RBP16.84■□□□□ 0.29
FOXA1-201ENST00000250448 MYRFLQ96LU7 910 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 TCF25Q9BQ70 676 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 RPF2Q9H7B2 306 aaKnown RBP16.84■□□□□ 0.29
FOXA1-201ENST00000250448 GIMAP2Q9UG22 337 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 OAZ3Q9UMX2 235 aa16.84■□□□□ 0.29
FOXA1-201ENST00000250448 TMX2-CTNND1H3BSU7 103 aa16.83■□□□□ 0.29
FOXA1-201ENST00000250448 GIPC1O14908 333 aa16.83■□□□□ 0.29
FOXA1-201ENST00000250448 ARPC2O15144 300 aa16.83■□□□□ 0.29
FOXA1-201ENST00000250448 RASAL1O95294 804 aa16.83■□□□□ 0.29
FOXA1-201ENST00000250448 WISP3O95389 354 aaPredicted RBP16.83■□□□□ 0.29
FOXA1-201ENST00000250448 IGLV3-27P01718 113 aa16.83■□□□□ 0.29
FOXA1-201ENST00000250448 CTSAP10619 480 aa16.83■□□□□ 0.29
FOXA1-201ENST00000250448 HOXC13P31276 330 aa16.83■□□□□ 0.29
FOXA1-201ENST00000250448 SLC6A4P31645 630 aa16.83■□□□□ 0.29
FOXA1-201ENST00000250448 WNT3AP56704 352 aa16.83■□□□□ 0.29
FOXA1-201ENST00000250448 CAPRIN1Q14444 709 aaKnown RBP16.83■□□□□ 0.29
FOXA1-201ENST00000250448 GPR158Q5T848 1215 aa16.83■□□□□ 0.29
FOXA1-201ENST00000250448 TMEM150AQ86TG1 271 aa16.83■□□□□ 0.29
FOXA1-201ENST00000250448 HS6ST3Q8IZP7 471 aa16.83■□□□□ 0.29
FOXA1-201ENST00000250448 MIER2Q8N344 545 aa16.83■□□□□ 0.29
FOXA1-201ENST00000250448 CD320Q9NPF0 282 aa16.83■□□□□ 0.29
FOXA1-201ENST00000250448 H3BMQ9 156 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 CLOCKO15516 846 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 KLKB1P03952 638 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 C7P10643 843 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 KCNC1P48547 511 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 PMS2P3Q13401 168 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 TMTC4Q5T4D3 741 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 TXNDC8Q6A555 127 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 TMEM207Q6UWW9 146 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 EXT2Q93063 718 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 COG8Q96MW5 612 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 RAD9AQ99638 391 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 C8orf4Q9NR00 106 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 VWA7Q9Y334 891 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 PTGDR2Q9Y5Y4 395 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 REV3LO60673 3130 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 DOCK4Q8N1I0 1966 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 C9JVG2 144 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 FGF10O15520 208 aaPredicted RBP16.83■□□□□ 0.28
FOXA1-201ENST00000250448 CLIC3O95833 236 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 DCKP27707 260 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 TTKP33981 857 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 ETFBP38117 255 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 CDKN2DP55273 166 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 CDH13P55290 713 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 HERVK_113P63132 956 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 NFKB2Q00653 900 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 CPNE9Q8IYJ1 553 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 TCEAL8Q8IYN2 117 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 LGI2Q8N0V4 545 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 SLC22A17Q8WUG5 538 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 CLP1Q92989 425 aaKnown RBP16.83■□□□□ 0.28
FOXA1-201ENST00000250448 C1orf74Q96LT6 269 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 DOK1Q99704 481 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 ERVK-6Q9BXR3 956 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 ZYG11BQ9C0D3 744 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 TBC1D23Q9NUY8 699 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 DNAJC15Q9Y5T4 150 aa16.83■□□□□ 0.28
FOXA1-201ENST00000250448 PIP5K1BO14986 540 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 ACOX3O15254 700 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 GFAPP14136 432 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 SLC6A2P23975 617 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 VARSP26640 1264 aaKnown RBP16.82■□□□□ 0.28
FOXA1-201ENST00000250448 EPHB3P54753 998 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 CYP4F8P98187 520 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 RAB39AQ14964 217 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 ANKDD1AQ495B1 522 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 TIGD7Q6NT04 549 aaPredicted RBP16.82■□□□□ 0.28
FOXA1-201ENST00000250448 KDELC1Q6UW63 502 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 ABRAXAS1Q6UWZ7 409 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 ISCA2Q86U28 154 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 CILP2Q8IUL8 1156 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 OFCC1Q8IZS5 231 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 TERB1Q8NA31 727 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 TWIST2Q8WVJ9 160 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 HDAC10Q969S8 669 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 THAP11Q96EK4 314 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 HMCESQ96FZ2 354 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 GID8Q9NWU2 228 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms