RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 NXNL1Q96CM4 212 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 MSANTD3Q96H12 275 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 PPP1R36Q96LQ0 422 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 GPR78Q96P69 363 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 TUBGCP5Q96RT8 1024 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 TTC1Q99614 292 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 UNKQ9C0B0 810 aaKnown RBP16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 TCF7L2Q9NQB0 619 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 TREX1Q9NSU2 369 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 A6NHS1 94 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 C16orf96A6NNT2 1141 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 DLX3O60479 287 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 SOCS5O75159 536 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 PDE5AO76074 875 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 PDGFBP01127 241 aaPredicted RBP16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 HLA-DPA1P20036 260 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 RAB10P61026 200 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 AP2B1P63010 937 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 BTKQ06187 659 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 MSLNQ13421 630 aaPredicted RBP16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 FZD5Q13467 585 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 CUL3Q13618 768 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 GAS6Q14393 721 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 METTL21CQ5VZV1 264 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 LRRC8EQ6NSJ5 796 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 UBALD2Q8IYN6 164 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 ARRDC3Q96B67 414 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 GABRG3Q99928 467 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 ARNT2Q9HBZ2 717 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 MRM3Q9HC36 420 aaKnown RBP16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 ZDHHC2Q9UIJ5 367 aa16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 FNDC3AQ9Y2H6 1198 aaKnown RBP16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 ARIH1Q9Y4X5 557 aaPredicted RBP16.82■□□□□ 0.28
CDKN1A-201ENST00000244741 MID1O15344 667 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 GRID2O43424 1007 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 BAG2O95816 211 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 EPOP01588 193 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 PRNPP04156 253 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 FGF1P05230 155 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 COL6A2P12110 1019 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 TFEBP19484 476 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 PRDX6P30041 224 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 HNF1BP35680 557 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 RPL14P50914 215 aaKnown RBP16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 STARD6P59095 220 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 MRPS21P82921 87 aaKnown RBP16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 SATB1Q01826 763 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 CAMK2GQ13555 558 aaPredicted RBP16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 STARD3Q14849 445 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 FBXO43Q4G163 708 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 ZNF805Q5CZA5 627 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 TRIM67Q6ZTA4 783 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 PARS2Q7L3T8 475 aaKnown RBP16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 TSPAN33Q86UF1 283 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 SPNS2Q8IVW8 549 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 DEFB107AQ8IZN7 70 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 LSMEM2Q8N112 164 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 EFCAB3Q8N7B9 438 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 MDGA1Q8NFP4 955 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 PTCD2Q8WV60 388 aaKnown RBP16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 ECHDC3Q96DC8 303 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 SHDQ96IW2 340 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 ZNF641Q96N77 438 aaPredicted RBP16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 LENG8Q96PV6 779 aaPredicted RBP16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 XPR1Q9UBH6 696 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 ITM2BQ9Y287 266 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 LRCH1Q9Y2L9 728 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 CKAP5Q14008 2032 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 NEMP1O14524 444 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 HDAC3O15379 428 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 DCNP07585 359 aaKnown RBP16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 STMN1P16949 149 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 TAS2R39P59534 338 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 SLC14A2Q15849 920 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 ZNF470Q6ECI4 717 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 LCA5Q86VQ0 697 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 C2CD4AQ8NCU7 369 aaPredicted RBP16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 ELMO2Q96JJ3 720 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 OMDQ99983 421 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 BPIFA1Q9NP55 256 aa16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 CORO1CQ9ULV4 474 aaPredicted RBP16.81■□□□□ 0.28
CDKN1A-201ENST00000244741 NPIPB15A6NHN6 443 aaPredicted RBP16.8■□□□□ 0.28
CDKN1A-201ENST00000244741 FKBP6O75344 327 aa16.8■□□□□ 0.28
CDKN1A-201ENST00000244741 SKAP2O75563 359 aaPredicted RBP16.8■□□□□ 0.28
CDKN1A-201ENST00000244741 TIMP2P16035 220 aa16.8■□□□□ 0.28
CDKN1A-201ENST00000244741 EPHA3P29320 983 aa16.8■□□□□ 0.28
CDKN1A-201ENST00000244741 POLD2P49005 469 aa16.8■□□□□ 0.28
CDKN1A-201ENST00000244741 PRKAA2P54646 552 aa16.8■□□□□ 0.28
CDKN1A-201ENST00000244741 KLC1Q07866 573 aa16.8■□□□□ 0.28
CDKN1A-201ENST00000244741 CCNIQ14094 377 aa16.8■□□□□ 0.28
CDKN1A-201ENST00000244741 ZRSR2Q15696 482 aaKnown RBP16.8■□□□□ 0.28
CDKN1A-201ENST00000244741 LSM12Q3MHD2 195 aaKnown RBP16.8■□□□□ 0.28
CDKN1A-201ENST00000244741 TSTD2Q5T7W7 516 aa16.8■□□□□ 0.28
CDKN1A-201ENST00000244741 SEL1L3Q68CR1 1132 aa16.8■□□□□ 0.28
CDKN1A-201ENST00000244741 S100A14Q9HCY8 104 aa16.8■□□□□ 0.28
CDKN1A-201ENST00000244741 CD93Q9NPY3 652 aa16.8■□□□□ 0.28
CDKN1A-201ENST00000244741 NDE1Q9NXR1 346 aa16.8■□□□□ 0.28
CDKN1A-201ENST00000244741 SERGEFQ9UGK8 458 aa16.8■□□□□ 0.28
CDKN1A-201ENST00000244741 FBXO5Q9UKT4 447 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms