RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 RBBP8Q99708 897 aa19.9■□□□□ 0.78
SNRPA-201ENST00000243563 CPNE1Q99829 537 aa19.9■□□□□ 0.78
SNRPA-201ENST00000243563 GALPQ9UBC7 116 aa19.9■□□□□ 0.78
SNRPA-201ENST00000243563 MED16Q9Y2X0 877 aa19.9■□□□□ 0.78
SNRPA-201ENST00000243563 OR2AG2A6NM03 316 aa19.89■□□□□ 0.77
SNRPA-201ENST00000243563 FOXO6A8MYZ6 492 aa19.89■□□□□ 0.77
SNRPA-201ENST00000243563 DNAJC6O75061 913 aa19.89■□□□□ 0.77
SNRPA-201ENST00000243563 ASMTLO95671 621 aa19.89■□□□□ 0.77
SNRPA-201ENST00000243563 MSH3P20585 1137 aa19.89■□□□□ 0.77
SNRPA-201ENST00000243563 CD151P48509 253 aa19.89■□□□□ 0.77
SNRPA-201ENST00000243563 BNC1Q01954 994 aa19.89■□□□□ 0.77
SNRPA-201ENST00000243563 BMPR2Q13873 1038 aa19.89■□□□□ 0.77
SNRPA-201ENST00000243563 ZNF547Q8IVP9 402 aa19.89■□□□□ 0.77
SNRPA-201ENST00000243563 RBFAQ8N0V3 343 aa19.89■□□□□ 0.77
SNRPA-201ENST00000243563 KRT222Q8N1A0 295 aa19.89■□□□□ 0.77
SNRPA-201ENST00000243563 FAM136AQ96C01 138 aa19.89■□□□□ 0.77
SNRPA-201ENST00000243563 FSCN3Q9NQT6 498 aa19.89■□□□□ 0.77
SNRPA-201ENST00000243563 EURLQ9NYK6 297 aa19.89■□□□□ 0.77
SNRPA-201ENST00000243563 SLC17A4Q9Y2C5 497 aa19.89■□□□□ 0.77
SNRPA-201ENST00000243563 MTO1Q9Y2Z2 717 aaKnown RBP19.89■□□□□ 0.77
SNRPA-201ENST00000243563 PCDH15Q96QU1 1955 aa19.89■□□□□ 0.77
SNRPA-201ENST00000243563 CACNB4O00305 520 aaPredicted RBP19.88■□□□□ 0.77
SNRPA-201ENST00000243563 BCAT2O15382 392 aaPredicted RBP19.88■□□□□ 0.77
SNRPA-201ENST00000243563 NIPSNAP2O75323 286 aa19.88■□□□□ 0.77
SNRPA-201ENST00000243563 RHOBTB1O94844 696 aa19.88■□□□□ 0.77
SNRPA-201ENST00000243563 HOXC4P09017 264 aaPredicted RBP19.88■□□□□ 0.77
SNRPA-201ENST00000243563 GP5P40197 560 aa19.88■□□□□ 0.77
SNRPA-201ENST00000243563 RABIFP47224 123 aa19.88■□□□□ 0.77
SNRPA-201ENST00000243563 YPEL5P62699 121 aa19.88■□□□□ 0.77
SNRPA-201ENST00000243563 ZNF844Q08AG5 666 aa19.88■□□□□ 0.77
SNRPA-201ENST00000243563 NAB1Q13506 487 aa19.88■□□□□ 0.77
SNRPA-201ENST00000243563 FZD2Q14332 565 aa19.88■□□□□ 0.77
SNRPA-201ENST00000243563 LYPLAL1Q5VWZ2 237 aa19.88■□□□□ 0.77
SNRPA-201ENST00000243563 ENPP7Q6UWV6 458 aa19.88■□□□□ 0.77
SNRPA-201ENST00000243563 GALNT7Q86SF2 657 aa19.88■□□□□ 0.77
SNRPA-201ENST00000243563 MFSD2AQ8NA29 543 aa19.88■□□□□ 0.77
SNRPA-201ENST00000243563 PIGKQ92643 395 aa19.88■□□□□ 0.77
SNRPA-201ENST00000243563 TSACCQ96A04 125 aaPredicted RBP19.88■□□□□ 0.77
SNRPA-201ENST00000243563 KLHDC7BQ96G42 594 aa19.88■□□□□ 0.77
SNRPA-201ENST00000243563 VPS39Q96JC1 886 aa19.88■□□□□ 0.77
SNRPA-201ENST00000243563 TM7SF3Q9NS93 570 aa19.88■□□□□ 0.77
SNRPA-201ENST00000243563 KLF15Q9UIH9 416 aa19.88■□□□□ 0.77
SNRPA-201ENST00000243563 LAMA1P25391 3075 aa19.88■□□□□ 0.77
SNRPA-201ENST00000243563 PATE3B3GLJ2 98 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 PRMT5O14744 637 aaPredicted RBP19.87■□□□□ 0.77
SNRPA-201ENST00000243563 SASH3O75995 380 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 CDK14O94921 469 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 ATP1B2P14415 290 aaPredicted RBP19.87■□□□□ 0.77
SNRPA-201ENST00000243563 ITGB6P18564 788 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 GMPRP36959 345 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 EIF2B5Q13144 721 aaKnown RBP19.87■□□□□ 0.77
SNRPA-201ENST00000243563 ZNF542PQ5EBM4 170 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 PEAR1Q5VY43 1037 aaPredicted RBP19.87■□□□□ 0.77
SNRPA-201ENST00000243563 CRTC3Q6UUV7 619 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 XKR5Q6UX68 686 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 NAPRTQ6XQN6 538 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 CYP4X1Q8N118 509 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 WDR92Q96MX6 357 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 TCEAL2Q9H3H9 227 aaPredicted RBP19.87■□□□□ 0.77
SNRPA-201ENST00000243563 RHOJQ9H4E5 214 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 CAB39LQ9H9S4 337 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 PLEKHM1Q9Y4G2 1056 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 ST14Q9Y5Y6 855 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 CHUKO15111 745 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 ZNF7P17097 686 aaPredicted RBP19.87■□□□□ 0.77
SNRPA-201ENST00000243563 RPS3P23396 243 aaKnown RBP eCLIP19.87■□□□□ 0.771e-9■■■■□ 21.9
SNRPA-201ENST00000243563 NSG1P42857 185 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 MSH2P43246 934 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 LIMK2P53671 638 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 CSE1LP55060 971 aaKnown RBP19.87■□□□□ 0.77
SNRPA-201ENST00000243563 CDKN2DP55273 166 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 CCDC6Q16204 474 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 ALG11Q2TAA5 492 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 PLA2G4EQ3MJ16 856 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 RNF187Q5TA31 235 aaPredicted RBP19.87■□□□□ 0.77
SNRPA-201ENST00000243563 TMEM220Q6QAJ8 160 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 ADGRD1Q6QNK2 874 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 MACC1Q6ZN28 852 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 C11orf96Q7Z7L8 435 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 OR56A4Q8NGH8 313 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 DCUN1D1Q96GG9 259 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 SLC30A3Q99726 388 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 OLFM1Q99784 485 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 AARSD1Q9BTE6 412 aaKnown RBP19.87■□□□□ 0.77
SNRPA-201ENST00000243563 CLPBQ9H078 707 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 SMOC1Q9H4F8 434 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 FAM86C1Q9NVL1 165 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 NSMCE4AQ9NXX6 385 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 SUFUQ9UMX1 484 aa19.87■□□□□ 0.77
SNRPA-201ENST00000243563 CACNA1HO95180 2353 aa19.86■□□□□ 0.77
SNRPA-201ENST00000243563 SPTY2D1-AS1A0A0U1RR47 76 aa19.86■□□□□ 0.77
SNRPA-201ENST00000243563 A0A1B0GVT2 93 aa19.86■□□□□ 0.77
SNRPA-201ENST00000243563 FAM95CA0A1B0GW59 222 aa19.86■□□□□ 0.77
SNRPA-201ENST00000243563 TLR4O00206 839 aa19.86■□□□□ 0.77
SNRPA-201ENST00000243563 NUAK1O60285 661 aa19.86■□□□□ 0.77
SNRPA-201ENST00000243563 PKMP14618 531 aaKnown RBP19.86■□□□□ 0.77
SNRPA-201ENST00000243563 THOP1P52888 689 aa19.86■□□□□ 0.77
SNRPA-201ENST00000243563 TCEA2Q15560 299 aa19.86■□□□□ 0.77
SNRPA-201ENST00000243563 PRAMEF14Q5SWL7 426 aa19.86■□□□□ 0.77
SNRPA-201ENST00000243563 GRTP1Q5TC63 336 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms