RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 NFATC2Q13469 925 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 CKAP5Q14008 2032 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 ARHGEF7Q14155 803 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 SF3A2Q15428 464 aaKnown RBP13.09□□□□□ -0.31
SLIRP-201ENST00000238688 PTPRNQ16849 979 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 HNRNPA1L2Q32P51 320 aaKnown RBP13.09□□□□□ -0.31
SLIRP-201ENST00000238688 TMEM215Q68D42 235 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 CCDC121Q6ZUS5 278 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 Q6ZVU0 165 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 OTOAQ7RTW8 1153 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 TRPM8Q7Z2W7 1104 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 SLC41A1Q8IVJ1 513 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 TSTD1Q8NFU3 115 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 PDLIM5Q96HC4 596 aaKnown RBP13.09□□□□□ -0.31
SLIRP-201ENST00000238688 GPR78Q96P69 363 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 RTKNQ9BST9 563 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 TPSD1Q9BZJ3 242 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 CIPCQ9C0C6 399 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 DERL2Q9GZP9 239 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 TNKS2Q9H2K2 1166 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 SMOC1Q9H4F8 434 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 ZDHHC6Q9H6R6 413 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 ACTR5Q9H9F9 607 aaPredicted RBP13.09□□□□□ -0.31
SLIRP-201ENST00000238688 CD248Q9HCU0 757 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 MARCH4Q9P2E8 410 aaPredicted RBP13.09□□□□□ -0.31
SLIRP-201ENST00000238688 SLCO3A1Q9UIG8 710 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 FKBPLQ9UIM3 349 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 GNPTGQ9UJJ9 305 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 HAO1Q9UJM8 370 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 INVSQ9Y283 1065 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 KCTD3Q9Y597 815 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 LAMA1P25391 3075 aa13.09□□□□□ -0.31
SLIRP-201ENST00000238688 ADAMTS9Q9P2N4 1935 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 GLYATL1P3A0A0U1RQE8 302 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.08□□□□□ -0.32
SLIRP-201ENST00000238688 PCNX2A6NKB5 2137 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 CCT8L1PA6NM43 557 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 SYCE1LA8MT33 242 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 TARM1B6A8C7 271 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 AURKAO14965 403 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 NPHS1O60500 1241 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 HNRNPCL1O60812 293 aaKnown RBP13.08□□□□□ -0.32
SLIRP-201ENST00000238688 ATP5HO75947 161 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 PRAMEF1O95521 474 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 PRKCGP05129 697 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 UGT2B4P06133 528 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 ZNF806P0C7X5 589 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 FGF3P11487 239 aaPredicted RBP13.08□□□□□ -0.32
SLIRP-201ENST00000238688 ITGB7P26010 798 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 VIPR1P32241 457 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 DGKEP52429 567 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 PDAP1Q13442 181 aaKnown RBP13.08□□□□□ -0.32
SLIRP-201ENST00000238688 PEX6Q13608 980 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 HSF5Q4G112 596 aaPredicted RBP13.08□□□□□ -0.32
SLIRP-201ENST00000238688 PPM1JQ5JR12 505 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 ANO7Q6IWH7 933 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 ERAP2Q6P179 960 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 CEP97Q8IW35 865 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 NRSN1Q8IZ57 195 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 FSTL5Q8N475 847 aaPredicted RBP13.08□□□□□ -0.32
SLIRP-201ENST00000238688 FRMD1Q8N878 549 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 PIWIL2Q8TC59 973 aaKnown RBP13.08□□□□□ -0.32
SLIRP-201ENST00000238688 NETO1Q8TDF5 533 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 OR8D1Q8WZ84 308 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 RAB7BQ96AH8 199 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 TUBB6Q9BUF5 446 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 CLPBQ9H078 707 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 WWP1Q9H0M0 922 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 TFB2MQ9H5Q4 396 aaKnown RBP13.08□□□□□ -0.32
SLIRP-201ENST00000238688 SUDS3Q9H7L9 328 aaPredicted RBP13.08□□□□□ -0.32
SLIRP-201ENST00000238688 CAB39LQ9H9S4 337 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 NCKIPSDQ9NZQ3 722 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 CDV3Q9UKY7 258 aaKnown RBP13.08□□□□□ -0.32
SLIRP-201ENST00000238688 RUVBL2Q9Y230 463 aaKnown RBP13.08□□□□□ -0.32
SLIRP-201ENST00000238688 WASF2Q9Y6W5 498 aa13.08□□□□□ -0.32
SLIRP-201ENST00000238688 PLXNB3Q9ULL4 1909 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 PRRT4C9JH25 899 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 G3V2L1 256 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 TM4SF5O14894 197 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 PHGDHO43175 533 aaKnown RBP13.07□□□□□ -0.32
SLIRP-201ENST00000238688 SDHBP21912 280 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 XPAP23025 273 aaPredicted RBP13.07□□□□□ -0.32
SLIRP-201ENST00000238688 NSG1P42857 185 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 TBCCQ15814 346 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 LACTB2Q53H82 288 aaPredicted RBP13.07□□□□□ -0.32
SLIRP-201ENST00000238688 ZRANB3Q5FWF4 1079 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 TECRLQ5HYJ1 363 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 RBM20Q5T481 1227 aaKnown RBP13.07□□□□□ -0.32
SLIRP-201ENST00000238688 FAM46CQ5VWP2 391 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 FAM91A1Q658Y4 838 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 PMS2CLQ68D20 193 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 CRTC1Q6UUV9 634 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 MACC1Q6ZN28 852 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 FAM47EQ6ZV65 393 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 DPPA4Q7L190 304 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 ZNF765Q7L2R6 523 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 CYP2U1Q7Z449 544 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 NLRP8Q86W28 1048 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 CHCHD4Q8N4Q1 142 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 AFAP1L2Q8N4X5 818 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms