RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 HSD17B1P14061 328 aa16■□□□□ 0.15
UBE3D-201ENST00000237186 ZNF26P17031 533 aaPredicted RBP16■□□□□ 0.15
UBE3D-201ENST00000237186 ZNF7P17097 686 aaPredicted RBP16■□□□□ 0.15
UBE3D-201ENST00000237186 MNX1P50219 401 aaPredicted RBP16■□□□□ 0.15
UBE3D-201ENST00000237186 RALGDSQ12967 914 aa16■□□□□ 0.15
UBE3D-201ENST00000237186 RPS6KA2Q15349 733 aa16■□□□□ 0.15
UBE3D-201ENST00000237186 CDKN3Q16667 212 aa16■□□□□ 0.15
UBE3D-201ENST00000237186 VPS26BQ4G0F5 336 aa16■□□□□ 0.15
UBE3D-201ENST00000237186 ATXN7L2Q5T6C5 722 aaPredicted RBP16■□□□□ 0.15
UBE3D-201ENST00000237186 C1orf53Q5VUE5 145 aa16■□□□□ 0.15
UBE3D-201ENST00000237186 LAYNQ6UX15 382 aa16■□□□□ 0.15
UBE3D-201ENST00000237186 HTR3DQ70Z44 454 aa16■□□□□ 0.15
UBE3D-201ENST00000237186 ADAMTSL2Q86TH1 951 aa16■□□□□ 0.15
UBE3D-201ENST00000237186 SLCO4A1Q96BD0 722 aa16■□□□□ 0.15
UBE3D-201ENST00000237186 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16■□□□□ 0.15
UBE3D-201ENST00000237186 AIG1Q9NVV5 245 aa16■□□□□ 0.15
UBE3D-201ENST00000237186 SPG21Q9NZD8 308 aa16■□□□□ 0.15
UBE3D-201ENST00000237186 CD274Q9NZQ7 290 aa16■□□□□ 0.15
UBE3D-201ENST00000237186 TBX21Q9UL17 535 aa16■□□□□ 0.15
UBE3D-201ENST00000237186 ZNF510Q9Y2H8 683 aa16■□□□□ 0.15
UBE3D-201ENST00000237186 TIMM22Q9Y584 194 aa16■□□□□ 0.15
UBE3D-201ENST00000237186 ANKRD36A6QL64 1941 aa16■□□□□ 0.15
UBE3D-201ENST00000237186 TRBV5-4A0A0C4DH59 114 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 NCF1BA6NI72 391 aaPredicted RBP15.99■□□□□ 0.15
UBE3D-201ENST00000237186 NCF1CA8MVU1 366 aaPredicted RBP15.99■□□□□ 0.15
UBE3D-201ENST00000237186 FXYD1O00168 92 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 NR5A2O00482 541 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 LILRB3O75022 631 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 NCF1P14598 390 aaPredicted RBP15.99■□□□□ 0.15
UBE3D-201ENST00000237186 LAG3P18627 525 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 ATXN3P54252 364 aaPredicted RBP15.99■□□□□ 0.15
UBE3D-201ENST00000237186 DIO3P55073 304 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 ECT2LQ008S8 904 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 RCAN2Q14206 197 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 TRIM60Q495X7 471 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 PDCD4Q53EL6 469 aaKnown RBP15.99■□□□□ 0.15
UBE3D-201ENST00000237186 FBXO48Q5FWF7 155 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 FOXB2Q5VYV0 432 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 TXNDC8Q6A555 127 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 GPRIN3Q6ZVF9 776 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 SNX20Q7Z614 316 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 DHFR2Q86XF0 187 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 CAMK1DQ8IU85 385 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 SLC15A3Q8IY34 581 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 ST13P4Q8IZP2 240 aaPredicted RBP15.99■□□□□ 0.15
UBE3D-201ENST00000237186 PBXIP1Q96AQ6 731 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 PLEKHG4BQ96PX9 1271 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 ZFYVE1Q9HBF4 777 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 ARMC1Q9NVT9 282 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 APPL1Q9UKG1 709 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 TANC1Q9C0D5 1861 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 SCN5AQ14524 2016 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 ABHD14A-ACY1A0A1B0GW23 586 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 AQP12BA6NM10 295 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 K7ERQ8 282 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 NME4O00746 187 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 GIPC1O14908 333 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 ALPIP09923 528 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 SLC6A2P23975 617 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 RFC2P35250 354 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 SLC7A9P82251 487 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 BCL2L1Q07817 233 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 BNIP2Q12982 314 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 LYPLAL1Q5VWZ2 237 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 SERPINA9Q86WD7 417 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 AQP12AQ8IXF9 295 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 APCDD1Q8J025 514 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 RBFAQ8N0V3 343 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 CBARPQ8N350 705 aaPredicted RBP15.99■□□□□ 0.15
UBE3D-201ENST00000237186 YIPF3Q9GZM5 350 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 CRISPLD2Q9H0B8 497 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 MRPL17Q9NRX2 175 aaKnown RBP15.99■□□□□ 0.15
UBE3D-201ENST00000237186 WBP1LQ9NX94 342 aa15.99■□□□□ 0.15
UBE3D-201ENST00000237186 LSM7Q9UK45 103 aaKnown RBP15.99■□□□□ 0.15
UBE3D-201ENST00000237186 A0A0U1RQS6 177 aa15.98■□□□□ 0.15
UBE3D-201ENST00000237186 SMAD6O43541 496 aaKnown RBP15.98■□□□□ 0.15
UBE3D-201ENST00000237186 STAMBPO95630 424 aa15.98■□□□□ 0.15
UBE3D-201ENST00000237186 CTPS1P17812 591 aa15.98■□□□□ 0.15
UBE3D-201ENST00000237186 ZFP36L2P47974 494 aaKnown RBP15.98■□□□□ 0.15
UBE3D-201ENST00000237186 PTPN5P54829 565 aa15.98■□□□□ 0.15
UBE3D-201ENST00000237186 ERVK-8P63133 956 aa15.98■□□□□ 0.15
UBE3D-201ENST00000237186 SBSNQ6UWP8 590 aa15.98■□□□□ 0.15
UBE3D-201ENST00000237186 CMTR2Q8IYT2 770 aaKnown RBP15.98■□□□□ 0.15
UBE3D-201ENST00000237186 OR2T34Q8NGX1 318 aa15.98■□□□□ 0.15
UBE3D-201ENST00000237186 OR2T3Q8NH03 318 aa15.98■□□□□ 0.15
UBE3D-201ENST00000237186 FIBINQ8TAL6 211 aa15.98■□□□□ 0.15
UBE3D-201ENST00000237186 LRRC58Q96CX6 371 aa15.98■□□□□ 0.15
UBE3D-201ENST00000237186 GBP5Q96PP8 586 aa15.98■□□□□ 0.15
UBE3D-201ENST00000237186 LYSMD1Q96S90 227 aa15.98■□□□□ 0.15
UBE3D-201ENST00000237186 SLC39A3Q9BRY0 314 aa15.98■□□□□ 0.15
UBE3D-201ENST00000237186 EFHD1Q9BUP0 239 aa15.98■□□□□ 0.15
UBE3D-201ENST00000237186 ABCB8Q9NUT2 735 aa15.98■□□□□ 0.15
UBE3D-201ENST00000237186 RIC8BQ9NVN3 520 aa15.98■□□□□ 0.15
UBE3D-201ENST00000237186 ZIM2Q9NZV7 527 aa15.98■□□□□ 0.15
UBE3D-201ENST00000237186 ASB1Q9Y576 335 aa15.98■□□□□ 0.15
UBE3D-201ENST00000237186 AP4B1Q9Y6B7 739 aa15.98■□□□□ 0.15
UBE3D-201ENST00000237186 IQCF5A8MTL0 148 aa15.97■□□□□ 0.15
UBE3D-201ENST00000237186 TEX28O15482 410 aa15.97■□□□□ 0.15
UBE3D-201ENST00000237186 MAP3K13O43283 966 aa15.97■□□□□ 0.15
UBE3D-201ENST00000237186 EEDO75530 441 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms