RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 ZNF473Q8WTR7 871 aaKnown RBP9.68□□□□□ -0.86
TTC1-201ENST00000231238 ZNF75CPQ92670 426 aaPredicted RBP9.68□□□□□ -0.86
TTC1-201ENST00000231238 ECHDC3Q96DC8 303 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 CITED4Q96RK1 184 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 P2RY13Q9BPV8 354 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 FGFR1OP2Q9NVK5 253 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 KCNK4Q9NYG8 393 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 EPS15L1Q9UBC2 864 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 B4GALT6Q9UBX8 382 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 TRANK1O15050 2925 aa9.68□□□□□ -0.86
TTC1-201ENST00000231238 C16orf96A6NNT2 1141 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 H7C0S8 307 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 VPS26AO75436 327 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 PRSS56P0CW18 603 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 TROVE2P10155 538 aaKnown RBP eCLIP9.67□□□□□ -0.86
TTC1-201ENST00000231238 MYL2P10916 166 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 COL6A2P12110 1019 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 ZNF30P17039 623 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 ZNF7P17097 686 aaPredicted RBP9.67□□□□□ -0.86
TTC1-201ENST00000231238 BGNP21810 368 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 ITGB7P26010 798 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 FOXN2P32314 431 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 WASP42768 502 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 PTGER3P43115 390 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 GLRBP48167 497 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 SOX9P48436 509 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 IRF9Q00978 393 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 SF3A3Q12874 501 aaKnown RBP eCLIP9.67□□□□□ -0.86
TTC1-201ENST00000231238 HTR4Q13639 388 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 CSHL1Q14406 222 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 ZNF460Q14592 562 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 AAK1Q2M2I8 961 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 GAB4Q2WGN9 574 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 ZNF789Q5FWF6 425 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 AGAP9Q5VTM2 703 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 FAM46CQ5VWP2 391 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 NAIF1Q69YI7 327 aaPredicted RBP9.67□□□□□ -0.86
TTC1-201ENST00000231238 PTRHD1Q6GMV3 140 aaKnown RBP9.67□□□□□ -0.86
TTC1-201ENST00000231238 SH2D5Q6ZV89 423 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 MICALCLQ6ZW33 695 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 SNX20Q7Z614 316 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 TSPAN33Q86UF1 283 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 ZSWIM9Q86XI8 627 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 SUGP1Q8IWZ8 645 aaKnown RBP9.67□□□□□ -0.86
TTC1-201ENST00000231238 CACNA2D3Q8IZS8 1091 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 ZNF513Q8N8E2 541 aaPredicted RBP9.67□□□□□ -0.86
TTC1-201ENST00000231238 ACVR1CQ8NER5 493 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 PIP4K2CQ8TBX8 421 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 KCTD4Q8WVF5 259 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 ISL2Q96A47 359 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 ERLEC1Q96DZ1 483 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 CHFRQ96EP1 664 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 LYSMD1Q96S90 227 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 OMDQ99983 421 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 ELAC2Q9BQ52 826 aaKnown RBP9.67□□□□□ -0.86
TTC1-201ENST00000231238 RPP25Q9BUL9 199 aaKnown RBP9.67□□□□□ -0.86
TTC1-201ENST00000231238 CLPBQ9H078 707 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 PRO3102Q9H379 93 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 NMRAL1Q9HBL8 299 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 SARS2Q9NP81 518 aaKnown RBP9.67□□□□□ -0.86
TTC1-201ENST00000231238 PCDH12Q9NPG4 1184 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 RAD18Q9NS91 495 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 CACNA2D2Q9NY47 1150 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 TAS2R13Q9NYV9 303 aa9.67□□□□□ -0.86
TTC1-201ENST00000231238 RANBP2P49792 3224 aaKnown RBP9.66□□□□□ -0.86
TTC1-201ENST00000231238 MYLKQ15746 1914 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 EBAG9O00559 213 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 BIRC5O15392 142 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 PLIN3O60664 434 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 ALX3O95076 343 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 TOP3BO95985 862 aaKnown RBP9.66□□□□□ -0.86
TTC1-201ENST00000231238 LTA4HP09960 611 aaKnown RBP9.66□□□□□ -0.86
TTC1-201ENST00000231238 ELFN1P0C7U0 828 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 CCDC166P0CW27 439 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 CPA3P15088 417 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 BPIP17213 487 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 POU3F3P20264 500 aaPredicted RBP9.66□□□□□ -0.86
TTC1-201ENST00000231238 CHRM3P20309 590 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 TAC1P20366 129 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 DRD4P21917 467 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 ALDH3A1P30838 453 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 MAGEA12P43365 314 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 PSMD8P48556 350 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 ELP6Q0PNE2 266 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 MESP2Q0VG99 397 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 ASPHQ12797 758 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 STX3Q13277 289 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 SMAD4Q13485 552 aaKnown RBP9.66□□□□□ -0.86
TTC1-201ENST00000231238 PEX6Q13608 980 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 ITGA9Q13797 1035 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 SEMA3AQ14563 771 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 STARD3Q14849 445 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 ACOX1Q15067 660 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 CHI3L2Q15782 390 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 ZSCAN26Q16670 478 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 TYSND1Q2T9J0 566 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 ZNF284Q2VY69 593 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 GPR33Q49SQ1 333 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 EGFLAMQ63HQ2 1017 aa9.66□□□□□ -0.86
TTC1-201ENST00000231238 UGT3A1Q6NUS8 523 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms