RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 AGO3Q9H9G7 860 aaKnown RBP10.5□□□□□ -0.73
VPS18-201ENST00000220509 UBA2Q9UBT2 640 aaPredicted RBP10.5□□□□□ -0.73
VPS18-201ENST00000220509 VTI1BQ9UEU0 232 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 FBXW11Q9UKB1 542 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 TEX264Q9Y6I9 313 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 UBDO15205 165 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 ZBTB14O43829 449 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 SYNCRIPO60506 623 aaKnown RBP10.5□□□□□ -0.73
VPS18-201ENST00000220509 KCNH1O95259 989 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 ESRRBO95718 433 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 LRG1P02750 347 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 MLNP12872 115 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 AOC1P19801 751 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 NMBRP28336 390 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 GABRB2P47870 512 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 LSM3P62310 102 aaKnown RBP10.5□□□□□ -0.73
VPS18-201ENST00000220509 MPP1Q00013 466 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 SLC18A2Q05940 514 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 ZIK1Q3SY52 487 aaPredicted RBP10.5□□□□□ -0.73
VPS18-201ENST00000220509 ZC3H12BQ5HYM0 836 aaKnown RBP10.5□□□□□ -0.73
VPS18-201ENST00000220509 MORN1Q5T089 497 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 CES4AQ5XG92 561 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 ESRP1Q6NXG1 681 aaKnown RBP10.5□□□□□ -0.73
VPS18-201ENST00000220509 RTL10Q7L3V2 364 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 GANCQ8TET4 914 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 CCDC126Q96EE4 140 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 TRIM54Q9BYV2 358 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 OLA1Q9NTK5 396 aaKnown RBP10.5□□□□□ -0.73
VPS18-201ENST00000220509 EGFL7Q9UHF1 273 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 GTF2IRD1Q9UHL9 959 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 SF3B1O75533 1304 aaKnown RBP eCLIP10.5□□□□□ -0.73
VPS18-201ENST00000220509 NR5A2O00482 541 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 SMIM18P0DKX4 95 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 CD1EP15812 388 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 TFEBP19484 476 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 CRHR1P34998 444 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 GRIA3P42263 894 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 AKR1D1P51857 326 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 CDH13P55290 713 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 CSNK2BP67870 215 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 TAGLNQ01995 201 aaKnown RBP10.5□□□□□ -0.73
VPS18-201ENST00000220509 NAB1Q13506 487 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 GRM3Q14832 879 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 HSF5Q4G112 596 aaPredicted RBP10.5□□□□□ -0.73
VPS18-201ENST00000220509 NIPAL1Q6NVV3 410 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 GK5Q6ZS86 529 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 ARCQ7LC44 396 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 GALNT13Q8IUC8 556 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 OR8K3Q8NH51 312 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 FANK1Q8TC84 345 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 SMOQ99835 787 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 FAM117AQ9C073 453 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 CRTAC1Q9NQ79 661 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 DNAJB4Q9UDY4 337 aa10.5□□□□□ -0.73
VPS18-201ENST00000220509 FARP1Q9Y4F1 1045 aaPredicted RBP10.5□□□□□ -0.73
VPS18-201ENST00000220509 TOR1BO14657 336 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 GPR32O75388 356 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 HDCP19113 662 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 UGT1A6P19224 532 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 UGT1A1P22309 533 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 UGT1A4P22310 534 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 UGT1A3P35503 534 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 UGT1A5P35504 534 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 CPOXP36551 454 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 RGS4P49798 205 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 RPL14P50914 215 aaKnown RBP10.49□□□□□ -0.73
VPS18-201ENST00000220509 GALNT1Q10472 559 aaPredicted RBP10.49□□□□□ -0.73
VPS18-201ENST00000220509 SEMA5AQ13591 1074 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 BRMS1LQ5PSV4 323 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 FSTL4Q6MZW2 842 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 ARHGAP36Q6ZRI8 547 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 TPGS1Q6ZTW0 290 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 DDX53Q86TM3 631 aaKnown RBP10.49□□□□□ -0.73
VPS18-201ENST00000220509 DENND6AQ8IWF6 608 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 ZNF276Q8N554 614 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 ARFGAP1Q8N6T3 406 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 AKAP1Q92667 903 aaKnown RBP eCLIP10.49□□□□□ -0.73
VPS18-201ENST00000220509 TRIM15Q9C019 465 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 ADAMTS10Q9H324 1103 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 VRTNQ9H8Y1 702 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 BPIFA1Q9NP55 256 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 MID1IP1Q9NPA3 183 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.49□□□□□ -0.73
VPS18-201ENST00000220509 URB1O60287 2271 aaKnown RBP10.49□□□□□ -0.73
VPS18-201ENST00000220509 E9PAM4 449 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 PIRO00625 290 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 CCNT2O60583 730 aaKnown RBP10.49□□□□□ -0.73
VPS18-201ENST00000220509 H2AFYO75367 372 aaKnown RBP10.49□□□□□ -0.73
VPS18-201ENST00000220509 GUCA1CO95843 209 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 HIST1H2AGP0C0S8 130 aaPredicted RBP10.49□□□□□ -0.73
VPS18-201ENST00000220509 MYL4P12829 197 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 KCNE1P15382 129 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 ZNF12P17014 697 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 HIST1H2ADP20671 130 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 SLC26A3P40879 764 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 RAB15P59190 212 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 TRIM25Q14258 630 aaKnown RBP10.49□□□□□ -0.73
VPS18-201ENST00000220509 ZNF460Q14592 562 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 PFKFB4Q16877 469 aa10.49□□□□□ -0.73
VPS18-201ENST00000220509 FAM205BPQ63HN1 556 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms