RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 TXNDC16Q9P2K2 825 aa26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 KLQ9UEF7 1012 aa26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 SLC17A4Q9Y2C5 497 aa26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 PRSS21Q9Y6M0 314 aa26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 DMDP11532 3685 aa26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 MYO15AQ9UKN7 3530 aa26.92■■□□□ 1.9
CHMP4B-201ENST00000217402 EXOC1LA0A1B0GW35 172 aa26.91■■□□□ 1.9
CHMP4B-201ENST00000217402 PATE3B3GLJ2 98 aa26.91■■□□□ 1.9
CHMP4B-201ENST00000217402 VEGFDO43915 354 aa26.91■■□□□ 1.9
CHMP4B-201ENST00000217402 MAGEC1O60732 1142 aa26.91■■□□□ 1.9
CHMP4B-201ENST00000217402 AHSGP02765 367 aa26.91■■□□□ 1.9
CHMP4B-201ENST00000217402 GABRB3P28472 473 aa26.91■■□□□ 1.9
CHMP4B-201ENST00000217402 MPLP40238 635 aa26.91■■□□□ 1.9
CHMP4B-201ENST00000217402 LEPRP48357 1165 aaKnown RBP26.91■■□□□ 1.9
CHMP4B-201ENST00000217402 CTSCP53634 463 aa26.91■■□□□ 1.9
CHMP4B-201ENST00000217402 NXPH1P58417 271 aa26.91■■□□□ 1.9
CHMP4B-201ENST00000217402 KLHL38Q2WGJ6 581 aa26.91■■□□□ 1.9
CHMP4B-201ENST00000217402 LAIR1Q6GTX8 287 aa26.91■■□□□ 1.9
CHMP4B-201ENST00000217402 LRRC6Q86X45 466 aa26.91■■□□□ 1.9
CHMP4B-201ENST00000217402 DCP2Q8IU60 420 aaKnown RBP26.91■■□□□ 1.9
CHMP4B-201ENST00000217402 OR1E3Q8WZA6 343 aa26.91■■□□□ 1.9
CHMP4B-201ENST00000217402 TSACCQ96A04 125 aaPredicted RBP26.91■■□□□ 1.9
CHMP4B-201ENST00000217402 ATXN7L3BQ96GX2 97 aa26.91■■□□□ 1.9
CHMP4B-201ENST00000217402 KCNH6Q9H252 994 aa26.91■■□□□ 1.9
CHMP4B-201ENST00000217402 ARGLU1Q9NWB6 273 aaPredicted RBP26.91■■□□□ 1.9
CHMP4B-201ENST00000217402 NSMCE4AQ9NXX6 385 aa26.91■■□□□ 1.9
CHMP4B-201ENST00000217402 PNMA8BQ9ULN7 279 aaPredicted RBP26.91■■□□□ 1.9
CHMP4B-201ENST00000217402 VPS9D1Q9Y2B5 631 aa26.91■■□□□ 1.9
CHMP4B-201ENST00000217402 PRKAB1Q9Y478 270 aa26.91■■□□□ 1.9
CHMP4B-201ENST00000217402 MUC6Q6W4X9 2439 aa26.91■■□□□ 1.9
CHMP4B-201ENST00000217402 POC1B-GALNT4F8VUJ3 575 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 PRMT5O14744 637 aaPredicted RBP26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 SCAMP1O15126 338 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 SHBGP04278 402 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 ATP1B2P14415 290 aaPredicted RBP26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 FMO4P31512 558 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 DUOXA1Q1HG43 343 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 ZNF542PQ5EBM4 170 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 BEND6Q5SZJ8 279 aaPredicted RBP26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 CRTC3Q6UUV7 619 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 RD3Q7Z3Z2 195 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 SUMF1Q8NBK3 374 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 HNRNPLLQ8WVV9 542 aaKnown RBP26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 SCG3Q8WXD2 468 aaKnown RBP26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 CYP4F12Q9HCS2 524 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 FSCN3Q9NQT6 498 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 ANKRD6Q9Y2G4 727 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 PCYT1BQ9Y5K3 369 aaPredicted RBP26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 PRSS38A1L453 326 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 FAM155BO75949 473 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 FUCA1P04066 466 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 CD151P48509 253 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 NAB1Q13506 487 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 ALG11Q2TAA5 492 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 FBXO38Q6PIJ6 1188 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 RABEPKQ7Z6M1 372 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 PARGQ86W56 976 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 TRAPPC5Q8IUR0 188 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 CPNE1Q99829 537 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 SMOC1Q9H4F8 434 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 CAAP1Q9H8G2 361 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 SUFUQ9UMX1 484 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 HCN4Q9Y3Q4 1203 aa26.9■■□□□ 1.9
CHMP4B-201ENST00000217402 NUAK1O60285 661 aa26.89■■□□□ 1.9
CHMP4B-201ENST00000217402 DNAJC6O75061 913 aa26.89■■□□□ 1.9
CHMP4B-201ENST00000217402 H2AFXP16104 143 aaPredicted RBP26.89■■□□□ 1.9
CHMP4B-201ENST00000217402 SRP54P61011 504 aaKnown RBP26.89■■□□□ 1.9
CHMP4B-201ENST00000217402 EIF2B5Q13144 721 aaKnown RBP26.89■■□□□ 1.9
CHMP4B-201ENST00000217402 KIF19Q2TAC6 998 aa26.89■■□□□ 1.9
CHMP4B-201ENST00000217402 TMEM220Q6QAJ8 160 aa26.89■■□□□ 1.9
CHMP4B-201ENST00000217402 HID1Q8IV36 788 aa26.89■■□□□ 1.9
CHMP4B-201ENST00000217402 BEND7Q8N7W2 519 aaPredicted RBP26.89■■□□□ 1.9
CHMP4B-201ENST00000217402 CEP76Q8TAP6 659 aa26.89■■□□□ 1.9
CHMP4B-201ENST00000217402 PAFAH2Q99487 392 aa26.89■■□□□ 1.9
CHMP4B-201ENST00000217402 P2RY12Q9H244 342 aa26.89■■□□□ 1.9
CHMP4B-201ENST00000217402 CARS2Q9HA77 564 aaKnown RBP26.89■■□□□ 1.9
CHMP4B-201ENST00000217402 ZNHIT2Q9UHR6 403 aa26.89■■□□□ 1.9
CHMP4B-201ENST00000217402 PCDHGA5Q9Y5G8 931 aa26.89■■□□□ 1.9
CHMP4B-201ENST00000217402 GP5P40197 560 aa26.88■■□□□ 1.89
CHMP4B-201ENST00000217402 GNPDA1P46926 289 aa26.88■■□□□ 1.89
CHMP4B-201ENST00000217402 BNC1Q01954 994 aa26.88■■□□□ 1.89
CHMP4B-201ENST00000217402 PLA2G4EQ3MJ16 856 aa26.88■■□□□ 1.89
CHMP4B-201ENST00000217402 TRIM61Q5EBN2 209 aa26.88■■□□□ 1.89
CHMP4B-201ENST00000217402 GALNT7Q86SF2 657 aa26.88■■□□□ 1.89
CHMP4B-201ENST00000217402 OR2W6PQ8NHA6 318 aa26.88■■□□□ 1.89
CHMP4B-201ENST00000217402 BIRC8Q96P09 236 aa26.88■■□□□ 1.89
CHMP4B-201ENST00000217402 DNAJC28Q9NX36 388 aa26.88■■□□□ 1.89
CHMP4B-201ENST00000217402 GNPTGQ9UJJ9 305 aa26.88■■□□□ 1.89
CHMP4B-201ENST00000217402 SNX11Q9Y5W9 270 aa26.88■■□□□ 1.89
CHMP4B-201ENST00000217402 TNFRSF10CO14798 259 aa26.87■■□□□ 1.89
CHMP4B-201ENST00000217402 SGTAO43765 313 aa26.87■■□□□ 1.89
CHMP4B-201ENST00000217402 PPARDQ03181 441 aa26.87■■□□□ 1.89
CHMP4B-201ENST00000217402 TCEA2Q15560 299 aa26.87■■□□□ 1.89
CHMP4B-201ENST00000217402 CTSL3PQ5NE16 218 aa26.87■■□□□ 1.89
CHMP4B-201ENST00000217402 PRAMEF14Q5SWL7 426 aa26.87■■□□□ 1.89
CHMP4B-201ENST00000217402 PTRHD1Q6GMV3 140 aaKnown RBP26.87■■□□□ 1.89
CHMP4B-201ENST00000217402 GALNT13Q8IUC8 556 aa26.87■■□□□ 1.89
CHMP4B-201ENST00000217402 NDNQ99608 321 aa26.87■■□□□ 1.89
CHMP4B-201ENST00000217402 GPR89AB7ZAQ6 455 aa26.87■■□□□ 1.89
CHMP4B-201ENST00000217402 CHUKO15111 745 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms