RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 EXOC3L1Q86VI1 746 aa16.4■□□□□ 0.22
POLR2E-201ENST00000215587 PELI3Q8N2H9 469 aa16.4■□□□□ 0.22
POLR2E-201ENST00000215587 CENPTQ96BT3 561 aa16.4■□□□□ 0.22
POLR2E-201ENST00000215587 ALKBH8Q96BT7 664 aaKnown RBP16.4■□□□□ 0.22
POLR2E-201ENST00000215587 HIC2Q96JB3 615 aa16.4■□□□□ 0.22
POLR2E-201ENST00000215587 CABS1Q96KC9 395 aa16.4■□□□□ 0.22
POLR2E-201ENST00000215587 BIRC8Q96P09 236 aa16.4■□□□□ 0.22
POLR2E-201ENST00000215587 KLF6Q99612 283 aaPredicted RBP16.4■□□□□ 0.22
POLR2E-201ENST00000215587 PCED1AQ9H1Q7 454 aa16.4■□□□□ 0.22
POLR2E-201ENST00000215587 C6orf106Q9H6K1 298 aaPredicted RBP16.4■□□□□ 0.22
POLR2E-201ENST00000215587 WDR26Q9H7D7 661 aa16.4■□□□□ 0.22
POLR2E-201ENST00000215587 MBNL1Q9NR56 388 aaKnown RBP16.4■□□□□ 0.22
POLR2E-201ENST00000215587 TAS2R13Q9NYV9 303 aa16.4■□□□□ 0.22
POLR2E-201ENST00000215587 TLK1Q9UKI8 766 aa16.4■□□□□ 0.22
POLR2E-201ENST00000215587 VWA7Q9Y334 891 aa16.4■□□□□ 0.22
POLR2E-201ENST00000215587 DMDP11532 3685 aa16.4■□□□□ 0.22
POLR2E-201ENST00000215587 GOLGA8RI6L899 631 aa16.39■□□□□ 0.21
POLR2E-201ENST00000215587 LATO43561 262 aa16.39■□□□□ 0.21
POLR2E-201ENST00000215587 AP2A2O94973 939 aa16.39■□□□□ 0.21
POLR2E-201ENST00000215587 OR56A5P0C7T3 313 aa16.39■□□□□ 0.21
POLR2E-201ENST00000215587 PYGBP11216 843 aa16.39■□□□□ 0.21
POLR2E-201ENST00000215587 ATP1B2P14415 290 aaPredicted RBP16.39■□□□□ 0.21
POLR2E-201ENST00000215587 HNRNPA2B1P22626 353 aaKnown RBP16.39■□□□□ 0.21
POLR2E-201ENST00000215587 OAS2P29728 719 aaKnown RBP16.39■□□□□ 0.21
POLR2E-201ENST00000215587 HPDP32754 393 aaPredicted RBP16.39■□□□□ 0.21
POLR2E-201ENST00000215587 IGFALSP35858 605 aa16.39■□□□□ 0.21
POLR2E-201ENST00000215587 CCNFP41002 786 aa16.39■□□□□ 0.21
POLR2E-201ENST00000215587 TAS2R39P59534 338 aa16.39■□□□□ 0.21
POLR2E-201ENST00000215587 GTF2H3Q13889 308 aa16.39■□□□□ 0.21
POLR2E-201ENST00000215587 INPP5AQ14642 412 aa16.39■□□□□ 0.21
POLR2E-201ENST00000215587 CTSL3PQ5NE16 218 aa16.39■□□□□ 0.21
POLR2E-201ENST00000215587 UGT3A1Q6NUS8 523 aa16.39■□□□□ 0.21
POLR2E-201ENST00000215587 SLC36A4Q6YBV0 504 aa16.39■□□□□ 0.21
POLR2E-201ENST00000215587 MACC1Q6ZN28 852 aa16.39■□□□□ 0.21
POLR2E-201ENST00000215587 CCDC91Q7Z6B0 441 aa16.39■□□□□ 0.21
POLR2E-201ENST00000215587 HEATR4Q86WZ0 1026 aa16.39■□□□□ 0.21
POLR2E-201ENST00000215587 C4orf33Q8N1A6 199 aa16.39■□□□□ 0.21
POLR2E-201ENST00000215587 ACVR1CQ8NER5 493 aa16.39■□□□□ 0.21
POLR2E-201ENST00000215587 KCNJ9Q92806 393 aa16.39■□□□□ 0.21
POLR2E-201ENST00000215587 MYOCQ99972 504 aa16.39■□□□□ 0.21
POLR2E-201ENST00000215587 TSSK1BQ9BXA7 367 aa16.39■□□□□ 0.21
POLR2E-201ENST00000215587 VPS11Q9H270 941 aa16.39■□□□□ 0.21
POLR2E-201ENST00000215587 FZD3Q9NPG1 666 aa16.39■□□□□ 0.21
POLR2E-201ENST00000215587 PRMT8Q9NR22 394 aaPredicted RBP16.39■□□□□ 0.21
POLR2E-201ENST00000215587 PHPT1Q9NRX4 125 aaPredicted RBP16.39■□□□□ 0.21
POLR2E-201ENST00000215587 PCMTD2Q9NV79 361 aa16.39■□□□□ 0.21
POLR2E-201ENST00000215587 CNOT6Q9ULM6 557 aaKnown RBP16.39■□□□□ 0.21
POLR2E-201ENST00000215587 DMTF1Q9Y222 760 aa16.39■□□□□ 0.21
POLR2E-201ENST00000215587 LRRK1Q38SD2 2015 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 CCDC163A0A0D9SF12 145 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 COPEO14579 308 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 FPGTO14772 594 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 RAD51BO15315 384 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 PHGDHO43175 533 aaKnown RBP16.38■□□□□ 0.21
POLR2E-201ENST00000215587 VEGFDO43915 354 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 MTX2O75431 263 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 BRAFP15056 766 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 NR1D1P20393 614 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 FDXRP22570 491 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 MAGEA12P43365 314 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 ID4P47928 161 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 CDKN2DP55273 166 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 B4GALNT1Q00973 533 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 PDAP1Q13442 181 aaKnown RBP16.38■□□□□ 0.21
POLR2E-201ENST00000215587 ZKSCAN8Q15776 578 aaPredicted RBP16.38■□□□□ 0.21
POLR2E-201ENST00000215587 DET1Q7L5Y6 550 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 TRIM74Q86UV6 250 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 FAM160A2Q8N612 972 aaPredicted RBP16.38■□□□□ 0.21
POLR2E-201ENST00000215587 CLDN19Q8N6F1 224 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 SNX19Q92543 992 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 CCDC97Q96F63 343 aaPredicted RBP16.38■□□□□ 0.21
POLR2E-201ENST00000215587 APOPT1Q96IL0 206 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 TSNARE1Q96NA8 513 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 PANX3Q96QZ0 392 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 OLFM1Q99784 485 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 SELENOSQ9BQE4 189 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 TEX101Q9BY14 249 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 POPDC3Q9HBV1 291 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 SSU72Q9NP77 194 aaKnown RBP16.38■□□□□ 0.21
POLR2E-201ENST00000215587 KCNK9Q9NPC2 374 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 FAM53CQ9NYF3 392 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 TRMT6Q9UJA5 497 aaKnown RBP16.38■□□□□ 0.21
POLR2E-201ENST00000215587 SMG5Q9UPR3 1016 aaKnown RBP16.38■□□□□ 0.21
POLR2E-201ENST00000215587 ANKRD6Q9Y2G4 727 aa16.38■□□□□ 0.21
POLR2E-201ENST00000215587 A0A087X1B8 175 aa16.37■□□□□ 0.21
POLR2E-201ENST00000215587 A0A096LPK6 155 aa16.37■□□□□ 0.21
POLR2E-201ENST00000215587 MAP3K13O43283 966 aa16.37■□□□□ 0.21
POLR2E-201ENST00000215587 NIPSNAP2O75323 286 aa16.37■□□□□ 0.21
POLR2E-201ENST00000215587 ASMTLO95671 621 aa16.37■□□□□ 0.21
POLR2E-201ENST00000215587 FTH1P02794 183 aa16.37■□□□□ 0.21
POLR2E-201ENST00000215587 C2P06681 752 aa16.37■□□□□ 0.21
POLR2E-201ENST00000215587 CHRM3P20309 590 aa16.37■□□□□ 0.21
POLR2E-201ENST00000215587 CD9P21926 228 aa16.37■□□□□ 0.21
POLR2E-201ENST00000215587 TRIM23P36406 574 aa16.37■□□□□ 0.21
POLR2E-201ENST00000215587 SKIV2L2P42285 1042 aaKnown RBP16.37■□□□□ 0.21
POLR2E-201ENST00000215587 CDK3Q00526 305 aa16.37■□□□□ 0.21
POLR2E-201ENST00000215587 SLC18A2Q05940 514 aa16.37■□□□□ 0.21
POLR2E-201ENST00000215587 TMEM115Q12893 351 aaPredicted RBP16.37■□□□□ 0.21
POLR2E-201ENST00000215587 KHDC1Q4VXA5 237 aaKnown RBP16.37■□□□□ 0.21
POLR2E-201ENST00000215587 CEP97Q8IW35 865 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms