RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 SPHK2Q9NRA0 654 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 SUCOQ9UBS9 1254 aaKnown RBP10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 PLLPQ9Y342 182 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 C4AP0C0L4 1744 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 NUP98P52948 1817 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 DYTNA2CJ06 578 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 MBLAC1A4D2B0 266 aaPredicted RBP10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 AP3D1O14617 1153 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 CTSAP10619 480 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 IL1R2P27930 398 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 RING1Q06587 406 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 OTUD3Q5T2D3 398 aaPredicted RBP10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 TTC27Q6P3X3 843 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 LRRTM4Q86VH4 590 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 ZDHHC13Q8IUH4 622 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 ZNF276Q8N554 614 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 SIDT2Q8NBJ9 832 aaKnown RBP10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 PHOSPHO2Q8TCD6 241 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 PLEKHO2Q8TD55 490 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 ABTB1Q969K4 478 aaPredicted RBP10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 APOLD1Q96LR9 279 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 C1orf74Q96LT6 269 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 TOX2Q96NM4 488 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 ATP6AP2A0A1C7CYW4 349 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 ATP6AP2O75787 350 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 COX4I1P13073 169 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 ACP5P13686 325 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 FOSL2P15408 326 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 HOXD13P35453 343 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 HSPA7P48741 367 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 RPL26P61254 145 aaKnown RBP10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 SOX4Q06945 474 aaPredicted RBP10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 STK32CQ86UX6 486 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 CEP295NLQ96MC4 621 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 MCMBPQ9BTE3 642 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 LMAN2LQ9H0V9 348 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 EPB41L4BQ9H329 900 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 SPAG4Q9NPE6 437 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 ABI3Q9P2A4 366 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 SALL4Q9UJQ4 1053 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 RPL26L1Q9UNX3 145 aaKnown RBP10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 SCAMP1O15126 338 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 KRT33AO76009 404 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 ZNF132P52740 706 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 PKNOX1P55347 436 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 SERINC3Q13530 473 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 MINDY4Q4G0A6 757 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 CPNE9Q8IYJ1 553 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 C12orf76Q8N812 135 aaPredicted RBP10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 ZNF366Q8N895 744 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 ZNF248Q8NDW4 579 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 ADAMTS15Q8TE58 950 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 C9orf16Q9BUW7 83 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 GTPBP2Q9BX10 602 aaKnown RBP10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 EPS8L2Q9H6S3 715 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 NOL11Q9H8H0 719 aaKnown RBP10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 COPG2Q9UBF2 871 aa10.26□□□□□ -0.77
NIPAL3-201ENST00000003912 FFAR2O15552 330 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 CFHP08603 1231 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 EPHA3P29320 983 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 CHIT1Q13231 466 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 GTF2H2Q13888 395 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 PAFAH1B3Q15102 231 aaKnown RBP10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 ANO7Q6IWH7 933 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 GTF2H2CQ6P1K8 395 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 ZYG11AQ6WRX3 759 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 FAM129CQ86XR2 697 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 FBXO30Q8TB52 745 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 BRINP2Q9C0B6 783 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 CCDC88AQ3V6T2 1871 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 J3KR12 359 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 TGDSO95455 350 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 CA3P07451 260 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 LCP2Q13094 533 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 RAB33AQ14088 237 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 ADRM1Q16186 407 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 ADGRD1Q6QNK2 874 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 TPRG1Q6ZUI0 275 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 DNAJB14Q8TBM8 379 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 AZIN2Q96A70 460 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 MRPS30Q9NP92 439 aaKnown RBP10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 IQCF5A8MTL0 148 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 SLC28A2O43868 658 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 OAZ2O95190 189 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 PRKCGP05129 697 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 ZNF24P17028 368 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 HOXA11P31270 313 aaPredicted RBP10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 PSME3P61289 254 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 TAF13Q15543 124 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 GKN2Q86XP6 184 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 OR6Y1Q8NGX8 325 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 SHISA4Q96DD7 197 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 TUBGCP5Q96RT8 1024 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 TMEM209Q96SK2 561 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 MIPEPQ99797 713 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 XYLT2Q9H1B5 865 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 DDX18Q9NVP1 670 aaKnown RBP10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 CCDC162PA2VCL2 907 aa10.25□□□□□ -0.77
NIPAL3-201ENST00000003912 SERPINA6P08185 405 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms