RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Cyp2c65Q148B1 490 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Zfp560Q3URI6 754 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Nutm2Q3V0C3 733 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Scn2bQ56A07 215 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 PkdccQ5RJI4 492 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Trnau1apQ80VC6 287 aaKnown RBP9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Vrk2Q8BN21 503 aaKnown RBP9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Parp12Q8BZ20 711 aaKnown RBP9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Atxn7l2Q8C8K6 696 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 ClmpQ8R373 373 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Slc35c2Q8VCX2 364 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 DeraQ91YP3 318 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Unc50Q9CQ61 259 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Rnf146Q9CZW6 359 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Duoxa2Q9D311 320 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Nme4Q9WV84 186 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Arih2Q9Z1K6 492 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Lamb2Q61292 1799 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Itih4A6X935 942 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Slfn9B1ARD6 910 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ceacam3E9Q6J4 706 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Pcsk6F6XJP7 959 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Kcnc1P15388 511 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Jak1P52332 1153 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Rps24P62849 133 aaKnown RBP9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 F8a1Q00558 380 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Dnal1Q05A62 190 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Zbtb2Q3V3W4 514 aaKnown RBP9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Usp22Q5DU02 525 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 NkaplQ5SZT7 395 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Phlda1Q62392 405 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Szrd1Q6NXN1 152 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Defb34Q7TNV8 81 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Abi3Q8BYZ1 367 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 KyQ8C8H8 661 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Sept8Q8CHH9 429 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Zcchc14Q8VIG0 956 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 DgkgQ91WG7 788 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Depdc7Q91WS7 511 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 XpotQ9CRT8 963 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 5530400C23RikQ9D3I0 173 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ap1m2Q9WVP1 423 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Bag6Q9Z1R2 1154 aaKnown RBP9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ice1E9Q286 2241 aaKnown RBP9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gm21731A0A286YDE9 180 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Trim30bE9PVL6 203 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Vmn1r238E9Q373 306 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Nlrp12E9Q5R7 1054 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Tpst2O88856 376 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Sox2P48432 319 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 OstnP61364 130 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Npy2rP97295 381 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Zfp658Q5PPQ4 887 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 G2e3Q5RJY2 716 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Cldn11Q60771 207 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Egfl8Q6GUQ1 293 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Prickle2Q80Y24 845 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Prdm8Q8BZ97 687 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Zdhhc7Q91WU6 308 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Stard13Q923Q2 1113 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ist1Q9CX00 362 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Psmd8Q9CX56 353 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 EbplQ9D0P0 206 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 4933425L06RikQ9D3Z8 585 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Q9D937 123 aaKnown RBP9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Hmgn3Q9DCB1 99 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Olig2Q9EQW6 323 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Cdh17Q9R100 827 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 NrapQ80XB4 1728 aa9.65□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Znf318Q99PP2 2237 aa9.65□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Itga8A2ARA8 1062 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Nsmce4aG3XA30 381 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Limk2O54785 638 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 CartptP56388 129 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 UcmaQ14BU0 138 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Echdc2Q3TLP5 296 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Hbq1bQ3U0A6 142 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Gpr19Q61121 415 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Rapgefl1Q68EF8 662 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Adamts16Q69Z28 1222 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Tmem270Q6UJB9 264 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 MtdhQ80WJ7 579 aaKnown RBP9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Kctd13Q8BGV7 329 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Klhl26Q8BGY4 606 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Q8BH50 245 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Mterf2Q8BKY8 385 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 HadhaQ8BMS1 763 aaKnown RBP9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Metap1Q8BP48 386 aaKnown RBP9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Fmo9Q8C116 539 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 P3h2Q8CG71 703 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Usp45Q8K387 813 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Mrgpra2Q91WW4 305 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Pcdhgc3Q91XX1 934 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Pcdha8Q91Y12 946 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Slc35b2Q91ZN5 431 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 VasnQ9CZT5 673 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Nos1apQ9D3A8 503 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Rsph14Q9D3W1 341 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 PgcQ9D7R7 392 aa9.64□□□□□ -0.87
Pcdh1-201ENSMUST00000057185 Isca2Q9DCB8 154 aa9.64□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms