RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Ribc2Q9D4Q1 309 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Timm50Q9D880 353 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Efcab9Q9DAM2 216 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Tor1aQ9ER39 333 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Katna1Q9WV86 491 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Myf6P15375 242 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Tbxas1P36423 533 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Itga11P61622 1188 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Lpar1P61793 364 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gtf2a2Q80ZM7 109 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Lgals12Q91VD1 314 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cmc1Q9CPZ8 106 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Ehd1Q9WVK4 534 aaKnown RBP11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Osbpl10S4R1M9 766 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Kif13bA0A286YCV9 1847 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Obox5G3X9P6 291 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Alox12P39655 663 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Ccr5P51682 354 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Eml1Q05BC3 814 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Ano7Q14AT5 859 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Snx21Q3UR97 363 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cpsf6Q6NVF9 551 aaKnown RBP11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Trim36Q80WG7 729 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Stx16Q8BVI5 326 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 ScaiQ8C8N2 606 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Ugt2b1Q8R084 529 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Wnt9aQ8R5M2 365 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Olfr532Q8VGT4 309 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Pard3bQ9CSB4 1203 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Fiz1Q9WTJ4 500 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Nup188Q6ZQH8 1759 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Ighv11-1A0A075B5R6 117 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cyp4a29A0A087WPC3 509 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Zmynd12A2BGJ5 363 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Scamp3O35609 349 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Ccnd3P30282 292 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Olfr616Q3KPB0 317 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Pnrc1Q3TWH3 297 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Tmprss11eQ5S248 423 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Ncs1Q8BNY6 190 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Fbxo48Q8CAT8 161 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 4932414N04RikQ8CEQ9 752 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Mob2Q8VI63 235 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cdkal1Q91WE6 578 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cnbd2Q9D5U8 673 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Serpini2Q9JK88 405 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Bag6Q9Z1R2 1154 aaKnown RBP11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Btbd35f28A2CFD5 498 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Nipsnap3aB1AWZ3 247 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Btbd35f30J3QML3 498 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Hps1O08983 704 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Hmox2O70252 315 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Idh2P54071 452 aaKnown RBP11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Nup107Q8BH74 926 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 HadhaQ8BMS1 763 aaKnown RBP11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Prdm8Q8BZ97 687 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Zcchc9Q8R1J3 271 aaKnown RBP11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Ndfip2Q91ZP6 311 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Lrrc40Q9CRC8 602 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Zswim7Q9CWQ2 152 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Deaf1Q9Z1T5 566 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 DckP43346 260 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 NfycP70353 335 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Tmem207P86045 143 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Nr4a2Q06219 598 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 MslnQ61468 625 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Avpr1aQ62463 423 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Slc25a23Q6GQS1 467 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 MtdhQ80WJ7 579 aaKnown RBP11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 LppQ8BFW7 613 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Pycr2Q922Q4 320 aaKnown RBP11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Tas1r3Q925D8 858 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Unc50Q9CQ61 259 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Ergic3Q9CQE7 383 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Atp13a2Q9CTG6 1169 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cnot11Q9CWN7 505 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Upk1aQ9D132 257 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Tchhl1Q9D3P1 638 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gria3Q9Z2W9 888 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 RttnQ8R4Y8 2226 aa11.23□□□□□ -0.61
Topbp1-201ENSMUST00000035164 A0A286YDU1 74 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 RerglB2RVE2 204 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Capn5O08688 640 aaKnown RBP11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Akap3O88987 864 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gstm1P10649 218 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 FesP16879 822 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gpx3P46412 226 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cyp2a12P56593 492 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cyp2c38P56655 490 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cep44Q5HZK1 386 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Arhgap12Q8C0D4 838 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Fam126bQ8C729 530 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Eif3lQ8QZY1 564 aaKnown RBP11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Tspan33Q8R3S2 283 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gtf2h3Q8VD76 309 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 DgkgQ91WG7 788 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 NgrnQ99KS2 293 aaKnown RBP11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Nmnat1Q9EPA7 285 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Mgea5Q9EQQ9 916 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 CtsjQ9R014 334 aa11.22□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms