RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 P33monoxQ9DBN4 303 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Bmp15Q9Z0L4 392 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Smurf2A2A5Z6 748 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Zfp607bG3X9H3 648 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Got2P05202 430 aaKnown RBP16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Sstr4P49660 385 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Hrh2P97292 397 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Pdss2Q33DR3 401 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Olfm4Q3UZZ4 505 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Mysm1Q69Z66 819 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Mtrf1lQ8BJU9 373 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Zc2hc1cQ8CCG1 527 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 PvrQ8K094 408 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Gimap3Q99MI6 301 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Mrpl54Q9CPW3 135 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Slc35a2Q9R0M8 390 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Vmn1r184E9Q2N4 314 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Pgbd1E9Q492 415 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Gm8011K7N6Y5 207 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Atp9bP98195 1146 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Olfr616Q3KPB0 317 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Lmf1Q3U3R4 574 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Pex11gQ6P6M5 241 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Scpep1Q920A5 452 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 1700129C05RikQ9CQ77 218 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Bcl10Q9Z0H7 233 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Gm10800D3Z496 220 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Alkal1J3QPP8 127 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Azin1O35484 448 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Fpr-rs3O88537 343 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Mup5P11591 180 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Ugt2b17P17717 530 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Hoxc10P31257 342 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 S100a9P31725 113 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Ufm1P61961 85 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Rps17P63276 135 aaKnown RBP16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Kcnj13P86046 360 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Hsd3b5Q61694 373 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Six3Q62233 333 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Fstl1Q62356 306 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Ddx55Q6ZPL9 600 aaKnown RBP16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Bmp3Q8BHE5 468 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Ugt2b38Q91WH2 530 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Tmem86aQ9D8N3 241 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Slc28a3Q9ERH8 703 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Nt5cQ9JM14 200 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 ApipQ9WVQ5 241 aa16.73■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Dennd4aE9Q8V6 1869 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Olfr1006A2ALD2 312 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 4930402K13RikB1AW18 415 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Zfp938E9Q9G3 579 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Cops5O35864 334 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Grk4O70291 574 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Igf2bp1O88477 577 aaKnown RBP16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 HunkO88866 714 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Apoa4P06728 395 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Gria1P23818 907 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Gli1P47806 1111 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Gpc4P51655 557 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Gpr143P70259 405 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Lsmem1Q3UQS2 128 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Phf12Q5SPL2 1003 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Fblim1Q71FD7 375 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Ireb2Q811J3 963 aaKnown RBP16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 A730061H03RikQ8BGD2 154 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Eme1Q8BJW7 570 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Q8K207 121 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Mark1Q8VHJ5 795 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Nprl3Q8VIJ8 569 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Rnf167Q91XF4 347 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Pcdhgb2Q91XX7 928 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Mgme1Q9CXC3 338 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 4930524N10RikQ9D519 233 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Cd302Q9DCG2 228 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Hapln2Q9ESM3 341 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Lcn5A2AJB7 192 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Tlx1P43345 332 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 TubP50586 505 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Cyp2r1Q6VVW9 501 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Celf6Q7TN33 460 aaKnown RBP16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Tecpr1Q80VP0 1166 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Gpr22Q8BZL4 432 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Slc15a5Q8CBB2 566 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Sirt3Q8R104 334 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Ranbp3Q9CT10 491 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Dhx34Q9DBV3 1145 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Pold3Q9EQ28 462 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Nectin3Q9JLB9 549 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Tanc1Q0VGY8 1856 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Trpm7Q923J1 1863 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Zfp738B8JJX8 793 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Zfp758E9QAA1 583 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Serpinb2P12388 415 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Arhgap39P59281 1107 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Prickle1Q3U5C7 832 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Hephl1Q3V1H3 1159 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Ilf2Q9CXY6 390 aaKnown RBP16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Cdh13Q9WTR5 714 aa16.72■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Polr2aP08775 1970 aaKnown RBP16.71■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Mmp10O55123 476 aa16.71■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms