RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Jak1P52332 1153 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Slc17a7Q3TXX4 560 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 StimateQ3UF25 288 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gpr149Q3UVY1 732 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 NkaplQ5SZT7 395 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Nrg1Q6DR99 700 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Zfyve1Q810J8 777 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 AA792892Q8C6S1 278 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 St7lQ8K4P7 559 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Bloc1s5Q8R015 185 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Asb17Q8VHP9 295 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ptbp2Q91Z31 531 aaKnown RBP9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Dus2Q9D7B1 493 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Exosc1Q9DAA6 195 aaKnown RBP9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 PrccQ9EQC8 491 aaKnown RBP9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Slc25a14Q9Z2B2 325 aa9.11□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm13040A2A8C4 496 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Zfp563B8JJZ9 448 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Kctd18E0CZ26 429 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Itga10E9Q6R1 1167 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Vmn2r14E9Q759 848 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 AoahO35298 574 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Nrp2O35375 931 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Atxn2O70305 1285 aaKnown RBP9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Cdc6O89033 562 aaKnown RBP9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Alas2P08680 587 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 PtpraP18052 829 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Pbx1P41778 430 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Mc4rP56450 332 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tbx4P70325 552 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ezh1P70351 747 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 HmgcrQ01237 887 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Meaf6Q2VPQ9 191 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Phactr4Q501J7 694 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Phlda1Q62392 405 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Scaf4Q6PFF0 1209 aaKnown RBP9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Jazf1Q80ZQ5 243 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Mfsd8Q8BH31 519 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Fbxw21Q8BI38 468 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Smad3Q8BUN5 425 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Mul1Q8VCM5 352 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Mospd1Q8VEL0 213 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Laptm4bQ91XQ6 227 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 MispQ9D279 648 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Dennd6bQ9D9V7 585 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Olfr742A2RTP5 311 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Otud4B2RRE7 1107 aaKnown RBP9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 4930558K02RikE0CXC6 182 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 H2-M11F6U8V3 335 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm6337K7N6X9 211 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm3115L7N285 211 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 CenpcP49452 906 aaKnown RBP9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tmem165P52875 323 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 TdgP56581 421 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 St14P56677 855 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ikzf2P81183 526 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Bend4P86174 541 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Cxcr5Q04683 374 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Acss3Q14DH7 682 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tnfaip8l3Q3TBL6 204 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Naa11Q3UX61 218 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Brsk1Q5RJI5 778 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gdpd5Q640M6 607 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Dnajc16Q80TN4 772 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Sp8Q8BMJ8 486 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Pyhin1Q8BV49 420 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Rgs8Q8BXT1 180 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Trmt13Q8BYH3 481 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm4922Q8C0N0 497 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Zfp446Q8C9M8 523 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Colec10Q8CF98 277 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tfb1mQ8JZM0 345 aaKnown RBP9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Zfp940Q8R2Q3 566 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Olfr801Q8VEU1 318 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Olfr345Q8VGK4 311 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 S100a14Q9D2Q8 104 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Arl10Q9QXJ4 243 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Asb4Q9WV71 426 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tll2Q9WVM6 1012 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Xpr1Q9Z0U0 695 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Mbd1Q9Z2E2 636 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm27029A2A4P4 543 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Actl10A2AKE7 346 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Vmn1r2A2AMT6 306 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm17174M0QWQ9 212 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 GhrP16882 650 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ndst2P52850 883 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Rit1P70426 219 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Arcn1Q5XJY5 511 aaKnown RBP9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Pkp4Q68FH0 1190 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Snx31Q6P8Y7 439 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gtf2a2Q80ZM7 109 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 4933430I17RikQ8BHW4 495 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Trmt6Q8CE96 497 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 LipmQ8K2A6 422 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tmprss4Q8VCA5 435 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Olfr1352Q8VGX5 309 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Snx4Q91YJ2 450 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Cyp4f3Q99N16 524 aa9.1□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Cmc1Q9CPZ8 106 aa9.1□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 37 ms