RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 ZCRB1Q8TBF4 217 aaKnown RBP20.55■□□□□ 0.88
PHGDH-231ENST00000641939 DDX54Q8TDD1 881 aaKnown RBP20.55■□□□□ 0.88
PHGDH-231ENST00000641939 RAPGEF4Q8WZA2 1011 aa20.55■□□□□ 0.88
PHGDH-231ENST00000641939 PLSCR1O15162 318 aa20.54■□□□□ 0.88
PHGDH-231ENST00000641939 PER1O15534 1290 aaPredicted RBP20.53■□□□□ 0.88
PHGDH-231ENST00000641939 TATP17735 454 aaPredicted RBP20.53■□□□□ 0.88
PHGDH-231ENST00000641939 ACSBG1Q96GR2 724 aa20.53■□□□□ 0.88
PHGDH-231ENST00000641939 NCAPD2Q15021 1401 aa20.53■□□□□ 0.88
PHGDH-231ENST00000641939 KCNQ2O43526 872 aa20.52■□□□□ 0.88
PHGDH-231ENST00000641939 BTAF1O14981 1849 aa20.52■□□□□ 0.88
PHGDH-231ENST00000641939 EIF4A2Q14240 407 aaKnown RBP20.5■□□□□ 0.87
PHGDH-231ENST00000641939 EYA1Q99502 592 aa20.5■□□□□ 0.87
PHGDH-231ENST00000641939 PSDA5PKW4 1024 aaPredicted RBP20.49■□□□□ 0.87
PHGDH-231ENST00000641939 PKD1L3Q7Z443 1732 aa20.49■□□□□ 0.87
PHGDH-231ENST00000641939 DOT1LQ8TEK3 1739 aa20.49■□□□□ 0.87
PHGDH-231ENST00000641939 R3HDM1Q15032 1099 aaKnown RBP20.47■□□□□ 0.87
PHGDH-231ENST00000641939 NBPF14Q5TI25 921 aa20.47■□□□□ 0.87
PHGDH-231ENST00000641939 CC2D1BQ5T0F9 858 aaKnown RBP20.46■□□□□ 0.87
PHGDH-231ENST00000641939 PCDH11XQ9BZA7 1347 aa20.46■□□□□ 0.87
PHGDH-231ENST00000641939 PCDH11YQ9BZA8 1340 aa20.46■□□□□ 0.87
PHGDH-231ENST00000641939 NPC1L1Q9UHC9 1359 aa20.46■□□□□ 0.87
PHGDH-231ENST00000641939 PROM2Q8N271 834 aa20.44■□□□□ 0.86
PHGDH-231ENST00000641939 PRIM1P49642 420 aaKnown RBP20.43■□□□□ 0.86
PHGDH-231ENST00000641939 TXNRD1Q16881 649 aa20.43■□□□□ 0.86
PHGDH-231ENST00000641939 IGSF1Q8N6C5 1336 aa20.43■□□□□ 0.86
PHGDH-231ENST00000641939 SYTL4Q96C24 671 aaPredicted RBP20.42■□□□□ 0.86
PHGDH-231ENST00000641939 SPG7Q9UQ90 795 aa20.42■□□□□ 0.86
PHGDH-231ENST00000641939 CYP27B1O15528 508 aa20.41■□□□□ 0.86
PHGDH-231ENST00000641939 MTHFSP49914 203 aa20.41■□□□□ 0.86
PHGDH-231ENST00000641939 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.41■□□□□ 0.86
PHGDH-231ENST00000641939 LRP5O75197 1615 aa20.4■□□□□ 0.86
PHGDH-231ENST00000641939 ITGB4P16144 1822 aa20.4■□□□□ 0.86
PHGDH-231ENST00000641939 PLEKHG2Q9H7P9 1386 aa20.4■□□□□ 0.86
PHGDH-231ENST00000641939 CNGB1Q14028 1251 aaPredicted RBP20.39■□□□□ 0.85
PHGDH-231ENST00000641939 TOGARAM1Q9Y4F4 1720 aa20.39■□□□□ 0.85
PHGDH-231ENST00000641939 IL13P35225 146 aa20.38■□□□□ 0.85
PHGDH-231ENST00000641939 ANO8Q9HCE9 1232 aaPredicted RBP20.38■□□□□ 0.85
PHGDH-231ENST00000641939 LY75O60449 1722 aa20.37■□□□□ 0.85
PHGDH-231ENST00000641939 NKX1-1Q15270 411 aaPredicted RBP20.35■□□□□ 0.85
PHGDH-231ENST00000641939 PAPPAQ13219 1627 aa20.35■□□□□ 0.85
PHGDH-231ENST00000641939 PHKG2P15735 406 aa20.34■□□□□ 0.85
PHGDH-231ENST00000641939 SULT6B1Q6IMI4 303 aa20.34■□□□□ 0.85
PHGDH-231ENST00000641939 AEBP1Q8IUX7 1158 aa20.34■□□□□ 0.85
PHGDH-231ENST00000641939 IFNL2Q8IZJ0 200 aa20.34■□□□□ 0.85
PHGDH-231ENST00000641939 STK32BQ9NY57 414 aa20.34■□□□□ 0.85
PHGDH-231ENST00000641939 SLC27A3Q5K4L6 730 aa20.33■□□□□ 0.85
PHGDH-231ENST00000641939 KDRP35968 1356 aa20.33■□□□□ 0.84
PHGDH-231ENST00000641939 SLC15A2Q16348 729 aa20.32■□□□□ 0.84
PHGDH-231ENST00000641939 AMOTQ4VCS5 1084 aa20.32■□□□□ 0.84
PHGDH-231ENST00000641939 PLEKHO1Q53GL0 409 aaPredicted RBP20.32■□□□□ 0.84
PHGDH-231ENST00000641939 MPRIPQ6WCQ1 1025 aa20.32■□□□□ 0.84
PHGDH-231ENST00000641939 LRRC4BQ9NT99 713 aa20.32■□□□□ 0.84
PHGDH-231ENST00000641939 CASZ1Q86V15 1759 aa20.31■□□□□ 0.84
PHGDH-231ENST00000641939 DIAPH1O60610 1272 aaKnown RBP20.31■□□□□ 0.84
PHGDH-231ENST00000641939 COL3A1P02461 1466 aaPredicted RBP20.3■□□□□ 0.84
PHGDH-231ENST00000641939 ZNF530Q6P9A1 599 aaPredicted RBP20.28■□□□□ 0.84
PHGDH-231ENST00000641939 HSP90AB1P08238 724 aaKnown RBP20.27■□□□□ 0.84
PHGDH-231ENST00000641939 PIGBQ92521 554 aa20.27■□□□□ 0.84
PHGDH-231ENST00000641939 CCNL1Q9UK58 526 aaPredicted RBP20.27■□□□□ 0.84
PHGDH-231ENST00000641939 QSER1Q2KHR3 1735 aa20.27■□□□□ 0.83
PHGDH-231ENST00000641939 PALLDQ8WX93 1383 aa20.26■□□□□ 0.83
PHGDH-231ENST00000641939 TAF1LQ8IZX4 1826 aa20.26■□□□□ 0.83
PHGDH-231ENST00000641939 HMOX1P09601 288 aa20.26■□□□□ 0.83
PHGDH-231ENST00000641939 KCNQ4P56696 695 aa20.26■□□□□ 0.83
PHGDH-231ENST00000641939 SMARCC1Q92922 1105 aaPredicted RBP20.26■□□□□ 0.83
PHGDH-231ENST00000641939 TMOD3Q9NYL9 352 aa20.26■□□□□ 0.83
PHGDH-231ENST00000641939 ZNF827Q17R98 1081 aa20.25■□□□□ 0.83
PHGDH-231ENST00000641939 C1orf141Q5JVX7 400 aa20.25■□□□□ 0.83
PHGDH-231ENST00000641939 DCAF5Q96JK2 942 aa20.25■□□□□ 0.83
PHGDH-231ENST00000641939 PDGFDQ9GZP0 370 aaPredicted RBP20.25■□□□□ 0.83
PHGDH-231ENST00000641939 SPON1Q9HCB6 807 aa20.25■□□□□ 0.83
PHGDH-231ENST00000641939 C5P01031 1676 aa20.25■□□□□ 0.83
PHGDH-231ENST00000641939 TUBGCP6Q96RT7 1819 aa20.25■□□□□ 0.83
PHGDH-231ENST00000641939 PPP2R1AP30153 589 aa20.24■□□□□ 0.83
PHGDH-231ENST00000641939 AKT1S1Q96B36 256 aa20.24■□□□□ 0.83
PHGDH-231ENST00000641939 CFAP53Q96M91 514 aa20.24■□□□□ 0.83
PHGDH-231ENST00000641939 VIRMAQ69YN4 1812 aaKnown RBP20.23■□□□□ 0.83
PHGDH-231ENST00000641939 ERVV-2B6SEH9 535 aa20.23■□□□□ 0.83
PHGDH-231ENST00000641939 SCN11AQ9UI33 1791 aa20.23■□□□□ 0.83
PHGDH-231ENST00000641939 KDM6AO15550 1401 aaPredicted RBP20.22■□□□□ 0.83
PHGDH-231ENST00000641939 U2SURPO15042 1029 aaKnown RBP20.22■□□□□ 0.83
PHGDH-231ENST00000641939 ZEB1P37275 1124 aaPredicted RBP20.22■□□□□ 0.83
PHGDH-231ENST00000641939 HMGB2P26583 209 aaKnown RBP20.21■□□□□ 0.83
PHGDH-231ENST00000641939 ZBTB7AO95365 584 aa20.2■□□□□ 0.82
PHGDH-231ENST00000641939 TFCP2L1Q9NZI6 479 aa20.2■□□□□ 0.82
PHGDH-231ENST00000641939 ASAP1Q9ULH1 1129 aa20.2■□□□□ 0.82
PHGDH-231ENST00000641939 AKAP4Q5JQC9 854 aa20.19■□□□□ 0.82
PHGDH-231ENST00000641939 CABP4P57796 275 aa20.18■□□□□ 0.82
PHGDH-231ENST00000641939 LOC102724428A0A0B4J2F2 783 aa20.17■□□□□ 0.82
PHGDH-231ENST00000641939 SIK1P57059 783 aa20.17■□□□□ 0.82
PHGDH-231ENST00000641939 DDX10Q13206 875 aaKnown RBP20.17■□□□□ 0.82
PHGDH-231ENST00000641939 MTFR1LQ9H019 292 aa20.17■□□□□ 0.82
PHGDH-231ENST00000641939 ATG3Q9NT62 314 aa20.17■□□□□ 0.82
PHGDH-231ENST00000641939 NUDCQ9Y266 331 aa20.17■□□□□ 0.82
PHGDH-231ENST00000641939 C4BP0C0L5 1744 aa20.16■□□□□ 0.82
PHGDH-231ENST00000641939 MTHFSDQ2M296 383 aaKnown RBP20.16■□□□□ 0.82
PHGDH-231ENST00000641939 ATF5Q9Y2D1 282 aaPredicted RBP20.16■□□□□ 0.82
PHGDH-231ENST00000641939 PNPLA7Q6ZV29 1317 aa20.16■□□□□ 0.82
PHGDH-231ENST00000641939 PPP1R1BQ9UD71 204 aaPredicted RBP20.15■□□□□ 0.82
PHGDH-231ENST00000641939 ZNF831Q5JPB2 1677 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms