RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 AKT1S1Q96B36 256 aa12.83□□□□□ -0.36
PHGDH-228ENST00000641847 APLP1P51693 650 aa12.82□□□□□ -0.36
PHGDH-228ENST00000641847 CARD14Q9BXL6 1004 aa12.82□□□□□ -0.36
PHGDH-228ENST00000641847 LRRC4BQ9NT99 713 aa12.82□□□□□ -0.36
PHGDH-228ENST00000641847 SLIT3O75094 1523 aa12.82□□□□□ -0.36
PHGDH-228ENST00000641847 EDC4Q6P2E9 1401 aaKnown RBP12.81□□□□□ -0.36
PHGDH-228ENST00000641847 IL2RBP14784 551 aa12.81□□□□□ -0.36
PHGDH-228ENST00000641847 HMGB2P26583 209 aaKnown RBP12.81□□□□□ -0.36
PHGDH-228ENST00000641847 ZNF692Q9BU19 519 aaPredicted RBP12.81□□□□□ -0.36
PHGDH-228ENST00000641847 NLRP2Q9NX02 1062 aa12.81□□□□□ -0.36
PHGDH-228ENST00000641847 PNPLA7Q6ZV29 1317 aa12.81□□□□□ -0.36
PHGDH-228ENST00000641847 PER1O15534 1290 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-228ENST00000641847 KNSTRNQ9Y448 316 aa12.8□□□□□ -0.36
PHGDH-228ENST00000641847 ANKRD26Q9UPS8 1709 aa12.79□□□□□ -0.36
PHGDH-228ENST00000641847 CD2APQ9Y5K6 639 aa12.79□□□□□ -0.36
PHGDH-228ENST00000641847 PAPPAQ13219 1627 aa12.79□□□□□ -0.36
PHGDH-228ENST00000641847 NHSQ6T4R5 1651 aa12.79□□□□□ -0.36
PHGDH-228ENST00000641847 PIK3C2AO00443 1686 aa12.78□□□□□ -0.36
PHGDH-228ENST00000641847 CNGB1Q14028 1251 aaPredicted RBP12.78□□□□□ -0.36
PHGDH-228ENST00000641847 SYTL4Q96C24 671 aaPredicted RBP12.78□□□□□ -0.36
PHGDH-228ENST00000641847 CGNL1Q0VF96 1302 aa12.78□□□□□ -0.36
PHGDH-228ENST00000641847 ABCC6O95255 1503 aa12.78□□□□□ -0.36
PHGDH-228ENST00000641847 WNK3Q9BYP7 1800 aa12.77□□□□□ -0.37
PHGDH-228ENST00000641847 AMER1Q5JTC6 1135 aaPredicted RBP12.77□□□□□ -0.37
PHGDH-228ENST00000641847 TTC21AQ8NDW8 1320 aa12.77□□□□□ -0.37
PHGDH-228ENST00000641847 PCNTO95613 3336 aa12.77□□□□□ -0.37
PHGDH-228ENST00000641847 NSD2O96028 1365 aa12.77□□□□□ -0.37
PHGDH-228ENST00000641847 NPC1L1Q9UHC9 1359 aa12.77□□□□□ -0.37
PHGDH-228ENST00000641847 ANP32CO43423 234 aa12.76□□□□□ -0.37
PHGDH-228ENST00000641847 CC2D1BQ5T0F9 858 aaKnown RBP12.76□□□□□ -0.37
PHGDH-228ENST00000641847 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.76□□□□□ -0.37
PHGDH-228ENST00000641847 TTC21BQ7Z4L5 1316 aa12.76□□□□□ -0.37
PHGDH-228ENST00000641847 COL18A1P39060 1754 aa12.75□□□□□ -0.37
PHGDH-228ENST00000641847 USP54Q70EL1 1684 aa12.75□□□□□ -0.37
PHGDH-228ENST00000641847 DDX54Q8TDD1 881 aaKnown RBP12.75□□□□□ -0.37
PHGDH-228ENST00000641847 ADCY9O60503 1353 aa12.74□□□□□ -0.37
PHGDH-228ENST00000641847 ERBB3P21860 1342 aa12.74□□□□□ -0.37
PHGDH-228ENST00000641847 FLAD1Q8NFF5 587 aa12.74□□□□□ -0.37
PHGDH-228ENST00000641847 CCNL1Q9UK58 526 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-228ENST00000641847 KAT6BQ8WYB5 2073 aa12.74□□□□□ -0.37
PHGDH-228ENST00000641847 NME9Q86XW9 330 aa12.73□□□□□ -0.37
PHGDH-228ENST00000641847 PRKRIP1Q9H875 184 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-228ENST00000641847 BTAF1O14981 1849 aa12.72□□□□□ -0.37
PHGDH-228ENST00000641847 FYB1O15117 783 aa12.72□□□□□ -0.37
PHGDH-228ENST00000641847 CAPN15O75808 1086 aa12.72□□□□□ -0.37
PHGDH-228ENST00000641847 TOMM70O94826 608 aa12.72□□□□□ -0.37
PHGDH-228ENST00000641847 PRIM1P49642 420 aaKnown RBP12.72□□□□□ -0.37
PHGDH-228ENST00000641847 KCNQ4P56696 695 aa12.72□□□□□ -0.37
PHGDH-228ENST00000641847 MSL1Q68DK7 614 aa12.72□□□□□ -0.37
PHGDH-228ENST00000641847 COL23A1Q86Y22 540 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-228ENST00000641847 ANKRD24Q8TF21 1146 aa12.72□□□□□ -0.37
PHGDH-228ENST00000641847 GGNBP2Q9H3C7 697 aa12.72□□□□□ -0.37
PHGDH-228ENST00000641847 KIF3CO14782 793 aa12.71□□□□□ -0.37
PHGDH-228ENST00000641847 QSER1Q2KHR3 1735 aa12.71□□□□□ -0.38
PHGDH-228ENST00000641847 USP31Q70CQ4 1352 aa12.7□□□□□ -0.38
PHGDH-228ENST00000641847 RALBP1Q15311 655 aa12.7□□□□□ -0.38
PHGDH-228ENST00000641847 MORC1Q86VD1 984 aa12.7□□□□□ -0.38
PHGDH-228ENST00000641847 TNS4Q8IZW8 715 aa12.7□□□□□ -0.38
PHGDH-228ENST00000641847 MIER1Q8N108 512 aa12.7□□□□□ -0.38
PHGDH-228ENST00000641847 DNAJC5GQ8N7S2 189 aa12.7□□□□□ -0.38
PHGDH-228ENST00000641847 C16orf71Q8IYS4 520 aaPredicted RBP12.69□□□□□ -0.38
PHGDH-228ENST00000641847 COG3Q96JB2 828 aa12.69□□□□□ -0.38
PHGDH-228ENST00000641847 COL24A1Q17RW2 1714 aa12.68□□□□□ -0.38
PHGDH-228ENST00000641847 IGSF1Q8N6C5 1336 aa12.68□□□□□ -0.38
PHGDH-228ENST00000641847 MYBBP1AQ9BQG0 1328 aaKnown RBP12.68□□□□□ -0.38
PHGDH-228ENST00000641847 PRELPP51888 382 aa12.68□□□□□ -0.38
PHGDH-228ENST00000641847 NFAT5O94916 1531 aa12.67□□□□□ -0.38
PHGDH-228ENST00000641847 TNNT2P45379 298 aaPredicted RBP12.67□□□□□ -0.38
PHGDH-228ENST00000641847 COL13A1Q5TAT6 717 aaPredicted RBP12.67□□□□□ -0.38
PHGDH-228ENST00000641847 RGPD5Q99666 1765 aa12.66□□□□□ -0.38
PHGDH-228ENST00000641847 PPP2R1AP30153 589 aa12.65□□□□□ -0.38
PHGDH-228ENST00000641847 ZCRB1Q8TBF4 217 aaKnown RBP12.65□□□□□ -0.38
PHGDH-228ENST00000641847 KLRG1Q96E93 195 aa12.65□□□□□ -0.38
PHGDH-228ENST00000641847 WWC3Q9ULE0 1092 aa12.65□□□□□ -0.38
PHGDH-228ENST00000641847 ADRA2BP18089 450 aa12.64□□□□□ -0.39
PHGDH-228ENST00000641847 LTV1Q96GA3 475 aaPredicted RBP12.64□□□□□ -0.39
PHGDH-228ENST00000641847 AK7Q96M32 723 aa12.64□□□□□ -0.39
PHGDH-228ENST00000641847 SMG6Q86US8 1419 aaKnown RBP12.63□□□□□ -0.39
PHGDH-228ENST00000641847 RBM46Q8TBY0 533 aaKnown RBP12.63□□□□□ -0.39
PHGDH-228ENST00000641847 LTN1O94822 1766 aa12.63□□□□□ -0.39
PHGDH-228ENST00000641847 MAP2P11137 1827 aaKnown RBP12.62□□□□□ -0.39
PHGDH-228ENST00000641847 CCER2I3L3R5 266 aa12.62□□□□□ -0.39
PHGDH-228ENST00000641847 FSTL1Q12841 308 aa12.62□□□□□ -0.39
PHGDH-228ENST00000641847 JMYQ8N9B5 988 aa12.62□□□□□ -0.39
PHGDH-228ENST00000641847 IP6K1Q92551 441 aa12.62□□□□□ -0.39
PHGDH-228ENST00000641847 FBLN1P23142 703 aa12.6□□□□□ -0.39
PHGDH-228ENST00000641847 RRS1Q15050 365 aaKnown RBP12.6□□□□□ -0.39
PHGDH-228ENST00000641847 ARHGAP27Q6ZUM4 889 aa12.6□□□□□ -0.39
PHGDH-228ENST00000641847 TUBGCP6Q96RT7 1819 aa12.6□□□□□ -0.39
PHGDH-228ENST00000641847 COL3A1P02461 1466 aaPredicted RBP12.59□□□□□ -0.39
PHGDH-228ENST00000641847 PHF14O94880 888 aa12.59□□□□□ -0.39
PHGDH-228ENST00000641847 CCDC184Q52MB2 194 aa12.59□□□□□ -0.39
PHGDH-228ENST00000641847 RAPGEF4Q8WZA2 1011 aa12.59□□□□□ -0.39
PHGDH-228ENST00000641847 SMARCC1Q92922 1105 aaPredicted RBP12.59□□□□□ -0.39
PHGDH-228ENST00000641847 MRS2Q9HD23 443 aa12.59□□□□□ -0.39
PHGDH-228ENST00000641847 NMRK2Q9NPI5 230 aa12.59□□□□□ -0.39
PHGDH-228ENST00000641847 EMILIN1Q9Y6C2 1016 aa12.59□□□□□ -0.39
PHGDH-228ENST00000641847 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.58□□□□□ -0.4
PHGDH-228ENST00000641847 LY75O60449 1722 aa12.58□□□□□ -0.4
PHGDH-228ENST00000641847 AMPHP49418 695 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms